RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 GID8Q9NWU2 228 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CPNE7Q9UBL6 633 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 FBXW2Q9UKT8 454 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 MAN2B2Q9Y2E5 1009 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SLC27A6Q9Y2P4 619 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PCDHGA10Q9Y5H3 936 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 AP4B1Q9Y6B7 739 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 WNT6Q9Y6F9 365 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CHD7Q9P2D1 2997 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 A0A1W2PN81 502 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 A0A1W2PQU0 124 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 BTNL10A8MVZ5 291 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PRAMEF26H0Y7S4 382 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 NUDT21O43809 227 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 SBK2P0C263 348 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CYP4B1P13584 511 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 BPIP17213 487 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 POLR2CP19387 275 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 AGXTP21549 392 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 IGFBP6P24592 240 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 CHRNA7P36544 502 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 LEPRP48357 1165 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 GPR15P49685 360 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 RBPJQ06330 500 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 MGAT5Q09328 741 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SEC23BQ15437 767 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 LY6G5CQ5SRR4 150 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 AGBL2Q5U5Z8 902 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 MBLAC2Q68D91 279 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TRIM69Q86WT6 500 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SLC15A4Q8N697 577 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PCDH20Q8N6Y1 951 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SETD9Q8NE22 299 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CADM4Q8NFZ8 388 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 OR10G6Q8NH81 332 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ZDHHC12Q96GR4 267 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TM9SF2Q99805 663 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 KCNS3Q9BQ31 491 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CENPKQ9BS16 269 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 HINT2Q9BX68 163 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CHODLQ9H9P2 273 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 EXTL2Q9UBQ6 330 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SCML2Q9UQR0 700 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CITO14578 2027 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 FUOMA2VDF0 154 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 AHRRA9YTQ3 701 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 FAM47E-STBD1D6RA91 191 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 AGPSO00116 658 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 KLK3P07288 261 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 ZNF806P0C7X5 589 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 RD3LP0DJH9 198 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 POU3F2P20265 443 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 CXCR2P25025 360 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PTPN6P29350 595 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ECHS1P30084 290 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SLC1A1P43005 524 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 GPR4P46093 362 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PSMD8P48556 350 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 NPY2RP49146 381 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 UBE2G2P60604 165 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 LARS2Q15031 903 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 TANGO2Q6ICL3 276 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 USP30Q70CQ3 517 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 DPPA2Q7Z7J5 298 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 EXOC3L1Q86VI1 746 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CYP4Z1Q86W10 505 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ATPAF2Q8N5M1 289 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 BHLHE23Q8NDY6 225 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SRFBP1Q8NEF9 429 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 OR1N1Q8NGS0 311 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CPA5Q8WXQ8 436 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 RAD51AP1Q96B01 352 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SERAC1Q96JX3 654 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TINAGL1Q9GZM7 467 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 NEUROG2Q9H2A3 272 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SMURF1Q9HCE7 757 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 DIABLOQ9NR28 239 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TRNAU1APQ9NX07 287 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 DNMT3BQ9UBC3 853 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 VPS4AQ9UN37 437 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PADI2Q9Y2J8 665 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CCDC154A6NI56 674 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 LINC01565O15544 149 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 OTCP00480 354 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 OPN1LWP04000 364 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TYRP14679 529 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PCSK2P16519 638 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PROZP22891 400 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CYP2F1P24903 491 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 NDUFS1P28331 727 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PTGER3P43115 390 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SLC9B1Q4ZJI4 515 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 VASH2Q86V25 355 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 BBS7Q8IWZ6 715 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 NAT16Q8N8M0 369 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms