RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PDCL3Q9H2J4 239 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 NT5MQ9NPB1 228 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 MKKSQ9NPJ1 570 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 OR6C2Q9NZP2 312 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 C19orf25Q9UFG5 118 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 NDRG3Q9UGV2 375 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 CDC14AQ9UNH5 594 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 WBP11Q9Y2W2 641 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 TESMINQ9Y4I5 508 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 LIPGQ9Y5X9 500 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 NFS1Q9Y697 457 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 ACOT7O00154 380 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 UBFD1O14562 309 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 NDC80O14777 642 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 DAPK3O43293 454 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 IL2RAP01589 272 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 GPD1P21695 349 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 IGFBP5P24593 272 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 SLC26A3P40879 764 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 PRKCIP41743 596 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 MC3RP41968 323 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 PRCPP42785 496 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 BPIFB4P59827 614 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 LRRC63Q05C16 580 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 ITKQ08881 620 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 PRKG2Q13237 762 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 BOP1Q14137 746 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 KIR2DS3Q14952 304 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 MUM1Q2TAK8 710 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 WASHC2DQ5SRD0 308 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 FNBP1LQ5T0N5 605 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 TRIM65Q6PJ69 517 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 WDR59Q6PJI9 974 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 LANCL3Q6ZV70 420 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 CFAP206Q8IYR0 622 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 LILRA3Q8N6C8 439 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 PHC3Q8NDX5 983 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 ARRDC2Q8TBH0 407 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 PIK3IP1Q96FE7 263 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 TNFRSF13CQ96RJ3 184 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 CYTH2Q99418 400 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 HGH1Q9BTY7 390 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 ANGPTL4Q9BY76 406 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 CLSTN2Q9H4D0 955 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 MAGEE1Q9HCI5 957 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 ALKBH4Q9NXW9 302 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 SHOC2Q9UQ13 582 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 EPN1Q9Y6I3 576 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 NOTCH3Q9UM47 2321 aa6.16□□□□□ -1.42
HERPUD1-217ENST00000569429 RYR2Q92736 4967 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FAM170AA1A519 330 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 ISM1B1AKI9 464 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 KDM4EB2RXH2 506 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 EEF1E1-BLOC1S5C9J1V9 151 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 C3orf80F5H4A9 247 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FOXN3O00409 490 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 IFRD1O00458 451 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FFAR3O14843 346 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 GPR42O15529 346 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 CCP110O43303 1012 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 EEF1E1O43324 174 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 GLSO94925 669 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 EPPINO95925 133 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 IL18BPO95998 194 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 TMIGD3P0DMS9 266 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 KRT3P12035 628 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 CRYGSP22914 178 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 LOXP28300 417 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 PEBP1P30086 187 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 ACVR1BP36896 505 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 HCAR3P49019 387 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 AGTR2P50052 363 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 EMP3P54852 163 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 MTTPP55157 894 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 MLF1P58340 268 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 GPR85P60893 370 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 NOMO3P69849 1222 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 SIX1Q15475 284 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 OCLNQ16625 522 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 CCDC40Q4G0X9 1142 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 BCL7AQ4VC05 210 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 COBLL1Q53SF7 1204 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FAM120AOSQ5T036 256 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 NDUFAF5Q5TEU4 345 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 VASNQ6EMK4 673 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 ABHD17CQ6PCB6 329 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 SLC22A16Q86VW1 577 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 ZC3H7AQ8IWR0 971 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FBXW8Q8N3Y1 598 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FAM109AQ8N4B1 249 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 AMER3Q8N944 861 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 HM13Q8TCT9 377 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 ELP5Q8TE02 316 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 CPA5Q8WXQ8 436 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 FAF2Q96CS3 445 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 TRMT61AQ96FX7 289 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 ART5Q96L15 291 aa6.15□□□□□ -1.42
HERPUD1-217ENST00000569429 MARK4Q96L34 752 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms