RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SYDE1Q6ZW31 735 aaPredicted RBP17.67■□□□□ 0.42
CLN6-204ENST00000564752 CUZD1Q86UP6 607 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 OR2L3Q8NG85 312 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 GABPB2Q8TAK5 448 aaPredicted RBP17.67■□□□□ 0.42
CLN6-204ENST00000564752 KCNJ9Q92806 393 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 MIPEPQ99797 713 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 FAM114A2Q9NRY5 505 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 GALPQ9UBC7 116 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 NXT1Q9UKK6 140 aaKnown RBP17.67■□□□□ 0.42
CLN6-204ENST00000564752 FBXO5Q9UKT4 447 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 PCDHGA10Q9Y5H3 936 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 HS3ST3B1Q9Y662 390 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 COPG1Q9Y678 874 aaKnown RBP17.67■□□□□ 0.42
CLN6-204ENST00000564752 A0A1W2PPV9 198 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 WIPF3A6NGB9 483 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 VSTM2BA6NLU5 285 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 BANF1O75531 89 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 TTC4O95801 387 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 CATP04040 527 aaKnown RBP17.66■□□□□ 0.42
CLN6-204ENST00000564752 PAFAH1B1P43034 410 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 OR1D4P47884 311 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 CLCN7P51798 805 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 FRMPD2BQ6IN97 320 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 IGFL2Q6UWQ7 119 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 SHISA6Q6ZSJ9 500 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 OR2A1Q8NGT9 310 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 GIMAP7Q8NHV1 300 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 NAT9Q9BTE0 207 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 SOX17Q9H6I2 414 aaPredicted RBP17.66■□□□□ 0.42
CLN6-204ENST00000564752 SEMA3GQ9NS98 782 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 IARS2Q9NSE4 1012 aaKnown RBP17.66■□□□□ 0.42
CLN6-204ENST00000564752 CTSFQ9UBX1 484 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 COMMD10Q9Y6G5 202 aa17.66■□□□□ 0.42
CLN6-204ENST00000564752 DOPEY1Q5JWR5 2465 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 LOC105369274A0A096LPK9 316 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 LOC102723532A0A0G2JNH3 316 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 HYKKA2RU49 373 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 ARHGEF33A8MVX0 844 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 CCDC188H7C350 402 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 ALOX12BO75342 701 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 PSIP1O75475 530 aaKnown RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 MED26O95402 600 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 GLRBP48167 497 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 CUL1Q13616 776 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 MORF4L2Q15014 288 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 BBS9Q3SYG4 887 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 SPANXN3Q5MJ09 141 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 ZNF549Q6P9A3 640 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 NEK10Q6ZWH5 1172 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 OR4N4Q8N0Y3 316 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 DTWD1Q8N5C7 304 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 METTL27Q8N6F8 245 aaPredicted RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 OR9A1PQ8NGU1 263 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 SLC30A3Q99726 388 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 EBNA1BP2Q99848 306 aaKnown RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 WDR77Q9BQA1 342 aaPredicted RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 TRIM51Q9BSJ1 452 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 KLHL42Q9P2K6 505 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 ZC3H7BQ9UGR2 993 aaKnown RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 ERRFI1Q9UJM3 462 aaPredicted RBP17.65■□□□□ 0.42
CLN6-204ENST00000564752 MED16Q9Y2X0 877 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 MAU2Q9Y6X3 613 aa17.65■□□□□ 0.42
CLN6-204ENST00000564752 A0A0J9YVX5 310 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 ANKUB1A6NFN9 424 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 NRP2O60462 931 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 VPS26AO75436 327 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 ERVK-10P10266 1014 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 ENO3P13929 434 aaPredicted RBP17.64■□□□□ 0.41
CLN6-204ENST00000564752 IVDP26440 423 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 FASTKQ14296 549 aaKnown RBP17.64■□□□□ 0.41
CLN6-204ENST00000564752 RBBP7Q16576 425 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 MSS51Q4VC12 460 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 AGAP7PQ5VUJ5 663 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 FBXO42Q6P3S6 717 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 RNF44Q7L0R7 432 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 PARP9Q8IXQ6 854 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 PDIK1LQ8N165 341 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 OR11G2Q8NGC1 345 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 PPP4R1Q8TF05 950 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 VPS50Q96JG6 964 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 AGAP4Q96P64 663 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 GPR21Q99679 349 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 AARSD1Q9BTE6 412 aaKnown RBP17.64■□□□□ 0.41
CLN6-204ENST00000564752 ZNF304Q9HCX3 659 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 NTNG1Q9Y2I2 539 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 CSAG2Q9Y5P2 127 aa17.64■□□□□ 0.41
CLN6-204ENST00000564752 A1L4Q6 167 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 OR2A25A4D2G3 310 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 MYO1CO00159 1063 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 SMAPO00193 183 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 TTI1O43156 1089 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 HAUS5O94927 633 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 LDLRP01130 860 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 ERGP11308 486 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 YBX1P67809 324 aaKnown RBP17.63■□□□□ 0.41
CLN6-204ENST00000564752 TSTA3Q13630 321 aaPredicted RBP17.63■□□□□ 0.41
CLN6-204ENST00000564752 NAA25Q14CX7 972 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 HIF1AQ16665 826 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms