RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LRRC3BQ96PB8 259 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 INPP4AQ96PE3 977 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 NODALQ96S42 347 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 FSD1Q9BTV5 496 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 OSBPL8Q9BZF1 889 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 VN1R1Q9GZP7 353 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 SRD5A3Q9H8P0 318 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF334Q9HCZ1 680 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 A4GALTQ9NPC4 353 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 SERINC1Q9NRX5 453 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC38A7Q9NVC3 462 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 DNAJC17Q9NVM6 304 aaKnown RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM118AQ9NWS6 357 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 TXNDC16Q9P2K2 825 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 TRPC4Q9UBN4 977 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 FBXW2Q9UKT8 454 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ACAD8Q9UKU7 415 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 STX8Q9UNK0 236 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 FAF1Q9UNN5 650 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 WDR83OSQ9Y284 106 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 A0A1W2PRB8 838 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 KRT87PA6NCN2 255 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 C5orf51A6NDU8 294 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PRSS46E5RG02 174 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 CCL24O00175 119 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 VEGFDO43915 354 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 LMX1BO60663 402 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 RPS6KA5O75582 802 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 STAM2O75886 525 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 AKAP3O75969 853 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 LUC7L3O95232 432 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 SIX3O95343 332 aaPredicted RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 WDPCPO95876 746 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC16A8O95907 504 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 GH1P01241 217 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 IGHV2-70P01814 119 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 SERPING1P05155 500 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 UMODP07911 640 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 HSPA8P11142 646 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 MYL6BP14649 208 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 EPORP19235 508 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PSMA3P25788 255 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 ALDH1B1P30837 517 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC6A6P31641 620 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 TIMP3P35625 211 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 HSD17B3P37058 310 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 MAGEB1P43366 347 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 SMSP52788 366 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PDX1P52945 283 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 STX1BP61266 288 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 RPS18P62269 152 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 DLK1P80370 383 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 GALK2Q01415 458 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 RASGEF1BQ0VAM2 473 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 TEFQ10587 303 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 CA9Q16790 459 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 KRTAP24-1Q3LI83 254 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PRAMEF8Q5VWM4 474 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM46CQ5VWP2 391 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 C11orf63Q6NUN7 778 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 CNSTQ6PJW8 725 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PRSS55Q6UWB4 352 aaPredicted RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 BTNL8Q6UX41 500 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 ISLR2Q6UXK2 745 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 MEX3BQ6ZN04 569 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 C15orf39Q6ZRI6 1047 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 MARK2Q7KZI7 788 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 RTN4RL2Q86UN3 420 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PLD3Q8IV08 490 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 DCUN1D3Q8IWE4 304 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 CNTN4Q8IWV2 1026 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 MAML2Q8IZL2 1156 aaPredicted RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 KLHDC1Q8N7A1 406 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 LPCAT1Q8NF37 534 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 KBTBD8Q8NFY9 601 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 OR2T12Q8NG77 320 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 C9orf43Q8TAL5 461 aaPredicted RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 FGFBP3Q8TAT2 258 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 RSPH1Q8WYR4 309 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM46BQ96A09 425 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PDLIM5Q96HC4 596 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM71F1Q96KD3 344 aaPredicted RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 GDAP1L1Q96MZ0 367 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 UHRF2Q96PU4 802 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PSD2Q9BQI7 771 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF559Q9BR84 538 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 ARRDC1-AS1Q9H2J1 176 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 CUEDC2Q9H467 287 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 UPF2Q9HAU5 1272 aaKnown RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 OLFML3Q9NRN5 406 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 PHPT1Q9NRX4 125 aaPredicted RBP2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 TMEM161AQ9NX61 479 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 FBXL5Q9UKA1 691 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 ITM2BQ9Y287 266 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 HEG1Q9ULI3 1381 aa2.99□□□□□ -1.93
SHCBP1-202ENST00000563219 KIAA1217Q5T5P2 1943 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 C19orf81C9J6K1 198 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 KBTBD13C9JR72 458 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 E9PI62 339 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 PGRMC2O15173 223 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms