RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 L3HYPDHQ96EM0 354 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 ZNF778Q96MU6 729 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 ASB16Q96NS5 453 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 SLC22A12Q96S37 553 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 CGREF1Q99674 301 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 TMEM30AQ9NV96 361 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 PTTG2Q9NZH5 202 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 DUX4Q9UBX2 424 aa7.35□□□□□ -1.23
TCF4-216ENST00000562680 PRRC2BQ5JSZ5 2229 aaKnown RBP7.35□□□□□ -1.23
TCF4-216ENST00000562680 DHRS12A0PJE2 317 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NR2F1P10589 423 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 EPORP19235 508 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 SLC6A2P23975 617 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 RABIFP47224 123 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 CLK3P49761 638 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 CNPY1Q3B7I2 92 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TTC23Q5W5X9 447 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 BORAQ6PGQ7 559 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TTC33Q6PID6 262 aaPredicted RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 RABEPKQ7Z6M1 372 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 ADGRG2Q8IZP9 1017 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 GJD3Q8N144 294 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 CYP4Z2PQ8N1L4 340 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 C11orf65Q8NCR3 313 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 OR2T34Q8NGX1 318 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NAT14Q8WUY8 206 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PDLIM5Q96HC4 596 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 CNBD2Q96M20 576 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 SEPHS2Q99611 448 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NOL6Q9H6R4 1146 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 RDH14Q9HBH5 336 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 STOML2Q9UJZ1 356 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 MROH6A6NGR9 719 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NPIPB15A6NHN6 443 aaPredicted RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 MFN2O95140 757 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PAK4O96013 591 aaPredicted RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 DHRS4L1P0CG22 281 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 HNRNPA2B1P22626 353 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 EEFSECP57772 596 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 DEFA1P59665 94 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 DEFA3P59666 94 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PRR5P85299 388 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.34□□□□□ -1.23
TCF4-216ENST00000562680 ZC3H12BQ5HYM0 836 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 CD300LGQ6UXG3 332 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 CHRDL2Q6WN34 429 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PLD6Q8N2A8 252 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 ZNF614Q8N883 585 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 OR4A15Q8NGL6 344 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TBCDQ9BTW9 1192 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 GALPQ9UBC7 116 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 GPR34Q9UPC5 381 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 MID1O15344 667 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 HTRA2O43464 458 aaPredicted RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 B3GALT2O43825 422 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 B4GALT3O60512 393 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PRAMEF12O95522 483 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 SEMA4FO95754 770 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NTRK1P04629 796 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 LAMP2P13473 410 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 CD9P21926 228 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 IRS1P35568 1242 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TMIGD1Q6UXZ0 262 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 LIPIQ6XZB0 460 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 LIX1Q8N485 282 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 OR4F6Q8NGB9 312 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 RNASE11Q8TAA1 199 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 PIH1D2Q8WWB5 315 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 APOL4Q9BPW4 351 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 SLC12A9Q9BXP2 914 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 SP140LQ9H930 580 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NEK6Q9HC98 313 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 ZSCAN32Q9NX65 697 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PHF11Q9UIL8 331 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 PCDH7O60245 1069 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 NUAK1O60285 661 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 RSL1D1O76021 490 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 OXSR1O95747 527 aaPredicted RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 GSTT2P0CG29 244 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 GSTT2BP0CG30 244 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TCF3P15923 654 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TIMP2P16035 220 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 GRIA3P42263 894 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 MRPS22P82650 360 aaKnown RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 VPS26BQ4G0F5 336 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 REP15Q6BDI9 236 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 IZUMO2Q6UXV1 221 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 CYP2R1Q6VVX0 501 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 FAM92BQ6ZTR7 304 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 RNF148Q8N7C7 305 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.34□□□□□ -1.23
TCF4-216ENST00000562680 HLA-CQ95604 372 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 ABCG4Q9H172 646 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 C1orf21Q9H246 121 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 RHBGQ9H310 441 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 EPB41L4BQ9H329 900 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 THAP10Q9P2Z0 257 aaPredicted RBP7.34□□□□□ -1.23
TCF4-216ENST00000562680 SLC22A14Q9Y267 594 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 SCN10AQ9Y5Y9 1956 aa7.34□□□□□ -1.23
TCF4-216ENST00000562680 TMEM221A6NGB7 291 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms