RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TERF1P54274 439 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 TLE4Q04727 773 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 FAM214AQ32MH5 1076 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF766Q5HY98 468 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 ABHD17BQ5VST6 288 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 ZC3H7AQ8IWR0 971 aaKnown RBP11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 ADAMTS18Q8TE60 1221 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 MAGED4Q96JG8 741 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF285Q96NJ3 590 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 CHST11Q9NPF2 352 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 STMN3Q9NZ72 180 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 NPIPA1Q9UND3 350 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 DNHD1Q96M86 4753 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 AKAP6Q13023 2319 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 OR5H15A6NDH6 313 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 GOLGA8KD6RF30 607 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 GOLGA8TH3BQL2 631 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 KDM1AO60341 852 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 GPC4O75487 556 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 BMP10O95393 424 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 NADKO95544 446 aaPredicted RBP11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 C1orf105O95561 183 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 ONECUT2O95948 504 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 APOA4P06727 396 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 GSTM1P09488 218 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 RFC3P40938 356 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 GSTM4Q03013 218 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 TRIM14Q14142 442 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 PARP6Q2NL67 630 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 MINDY4Q4G0A6 757 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 FASTKD1Q53R41 847 aaKnown RBP11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 TSTD2Q5T7W7 516 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 PTRHD1Q6GMV3 140 aaKnown RBP11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 SPINK14Q6IE38 97 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 FBXO42Q6P3S6 717 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 LRRC8BQ6P9F7 803 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 AFTPHQ6ULP2 937 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 CES3Q6UWW8 571 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 PPP1R21Q6ZMI0 780 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 RNF44Q7L0R7 432 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 ADCK2Q7Z695 626 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 OTUD6BQ8N6M0 293 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 CSNK1A1LQ8N752 337 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 OR2A1Q8NGT9 310 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 OR4L1Q8NH43 312 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 SUN3Q8TAQ9 357 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 HAS2Q92819 552 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 SLC22A18Q96BI1 424 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 MTFMTQ96DP5 389 aaKnown RBP11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 HCN3Q9P1Z3 774 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 ABI3Q9P2A4 366 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 GALPQ9UBC7 116 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 PCDHA3Q9Y5H8 950 aa11.08□□□□□ -0.64
NSMCE1-202ENST00000561960 IGKV1-8A0A0C4DH67 115 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 AKR1B15C9JRZ8 316 aaPredicted RBP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 QSOX1O00391 747 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 FOXS1O43638 330 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 NIPSNAP2O75323 286 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 CRYABP02511 175 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 RPN2P04844 631 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 TPM3P06753 285 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 EIF3BP55884 814 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 PRAMEP78395 509 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 RBPJQ06330 500 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 TCEAL1Q15170 157 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 MUM1Q2TAK8 710 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 BTBD16Q32M84 506 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 UNC5DQ6UXZ4 953 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 RPTNQ6XPR3 784 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 MEX3BQ6ZN04 569 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 OR9A4Q8NGU2 314 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 GSDMBQ8TAX9 411 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 ASZ1Q8WWH4 475 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 SREK1Q8WXA9 508 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 NACC2Q96BF6 587 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 VPS50Q96JG6 964 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 CCDC138Q96M89 665 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 NPAS2Q99743 824 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 ZFYVE21Q9BQ24 234 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 ZNF700Q9H0M5 742 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 CATSPERZQ9NTU4 200 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 RIC8BQ9NVN3 520 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 PCYOX1Q9UHG3 505 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 INTUQ9ULD6 942 aa11.07□□□□□ -0.64
NSMCE1-202ENST00000561960 ACANP16112 2415 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 HAT1O14929 419 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CBFA2T2O43439 604 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CDC123O75794 336 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CLDN14O95500 239 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 IFNB1P01574 187 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 ANXA5P08758 320 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 NR0B1P51843 470 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 HADHBP55084 474 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms