RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 REXO1L1PQ8IX06 675 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 PARP9Q8IXQ6 854 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 RASGEF1CQ8N431 466 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 MCUQ8NE86 351 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 PPP4R1Q8TF05 950 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 MIEF2Q96C03 454 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 C10orf90Q96M02 699 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 SLC30A3Q99726 388 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 WDR77Q9BQA1 342 aaPredicted RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 CRB3Q9BUF7 120 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 XAB2Q9HCS7 855 aaKnown RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 KLHL42Q9P2K6 505 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 CSAG2Q9Y5P2 127 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 PCM1Q15154 2024 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 NBPF19A0A087WUL8 3843 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 IGLV3-12A0A075B6K2 115 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 ZCWPW2A0A1B0GU75 182 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 SLC16A8O95907 504 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 PNLIPRP1P54315 467 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 CTBP1Q13363 440 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 THOC5Q13769 683 aaKnown RBP15.46■□□□□ 0.07
SNX1-213ENST00000561026 HIF1AQ16665 826 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 TTLL9Q3SXZ7 439 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 PAQR7Q86WK9 346 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 DENND6AQ8IWF6 608 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 FBXO15Q8NCQ5 510 aaPredicted RBP15.46■□□□□ 0.07
SNX1-213ENST00000561026 ASB11Q8WXH4 323 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 ZNF669Q96BR6 464 aaPredicted RBP15.46■□□□□ 0.07
SNX1-213ENST00000561026 MS4A14Q96JA4 679 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 SERPINB12Q96P63 405 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 MESP1Q9BRJ9 268 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 LHPPQ9H008 270 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 TAC3Q9UHF0 121 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 CDC14AQ9UNH5 594 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 MED16Q9Y2X0 877 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 NEU2Q9Y3R4 380 aa15.46■□□□□ 0.07
SNX1-213ENST00000561026 DOCK10Q96BY6 2186 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 UNC79Q9P2D8 2635 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 ZNF839A8K0R7 811 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 E7ENX8 843 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 GOLGA8MH3BSY2 632 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 VPS26AO75436 327 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 DDAH2O95865 285 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 F7P08709 466 aaPredicted RBP15.45■□□□□ 0.06
SNX1-213ENST00000561026 TAP2Q03519 686 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 RELAQ04206 551 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 Q0VFX4 171 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 TSTA3Q13630 321 aaPredicted RBP15.45■□□□□ 0.06
SNX1-213ENST00000561026 CYP1B1Q16678 543 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 VWA2Q5GFL6 755 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 DOPEY1Q5JWR5 2465 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 ICE2Q659A1 982 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 ATG9BQ674R7 924 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 HIST2H2BCQ6DN03 193 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 ZNF425Q6IV72 752 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 ZNF549Q6P9A3 640 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 LAPTM4BQ86VI4 370 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 PRSS58Q8IYP2 241 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 CSNK1A1LQ8N752 337 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 GIMAP7Q8NHV1 300 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 DNAJB14Q8TBM8 379 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 ZNF480Q8WV37 535 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 KCNJ9Q92806 393 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 MVB12AQ96EY5 273 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 THOC3Q96J01 351 aaKnown RBP15.45■□□□□ 0.06
SNX1-213ENST00000561026 PBKQ96KB5 322 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 CABS1Q96KC9 395 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 OR2A5Q96R48 311 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 TEX15Q9BXT5 2789 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 SYNPO2LQ9H987 977 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 FBXO6Q9NRD1 293 aaPredicted RBP15.45■□□□□ 0.06
SNX1-213ENST00000561026 UTP6Q9NYH9 597 aaKnown RBP15.45■□□□□ 0.06
SNX1-213ENST00000561026 C3orf18Q9UK00 162 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 RUVBL1Q9Y265 456 aaKnown RBP15.45■□□□□ 0.06
SNX1-213ENST00000561026 NTNG1Q9Y2I2 539 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 JRKLQ9Y4A0 524 aa15.45■□□□□ 0.06
SNX1-213ENST00000561026 NUP210LQ5VU65 1888 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 POLEQ07864 2286 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 ANKUB1A6NFN9 424 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 WIPF3A6NGB9 483 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 GFYI3L273 518 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 KIF5CO60282 957 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 CCNDBP1O95273 360 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 HPP00738 406 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 ACPPP15309 386 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 FBLP22087 321 aaKnown RBP15.44■□□□□ 0.06
SNX1-213ENST00000561026 COILP38432 576 aaPredicted RBP15.44■□□□□ 0.06
SNX1-213ENST00000561026 MAGEA3P43357 314 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 CUL1Q13616 776 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 DSG2Q14126 1118 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 CCDC137Q6PK04 289 aaKnown RBP15.44■□□□□ 0.06
SNX1-213ENST00000561026 CYHR1Q6ZMK1 362 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 LMNTD2Q8IXW0 634 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 AGGF1Q8N302 714 aaeCLIP15.44■□□□□ 0.06
SNX1-213ENST00000561026 PPFIBP2Q8ND30 876 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 CCDC68Q9H2F9 335 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 AGPAT4Q9NRZ5 378 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 TRPC4Q9UBN4 977 aa15.44■□□□□ 0.06
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