RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SUV39H2Q9H5I1 410 aa12.89□□□□□ -0.35
CSPG4P11-201ENST00000560634 FAM120CQ9NX05 1096 aaKnown RBP12.89□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF726A6NNF4 738 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 RB1P06400 928 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 NRG3P56975 720 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 CDK6Q00534 326 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 DEFA5Q01523 94 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ST3GAL3Q11203 375 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 NXPE1Q8N323 547 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 RDH12Q96NR8 316 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 LOC100130705A0A1B0GUX0 176 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ASPAP45381 313 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 HMGCS1Q01581 520 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 SP2Q02086 613 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 SETD6Q8TBK2 473 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 GAL3ST1Q99999 423 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 TBL1XR1Q9BZK7 514 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 CTPS2Q9NRF8 586 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 F8A1P23610 371 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 FSHRP23945 695 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 CXCR1P25024 350 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR12D2P58182 307 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 TAS2R43P59537 309 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 PON3Q15166 354 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 KLHL26Q53HC5 615 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ARL9Q6T311 187 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 TMEM110Q86TL2 294 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 CPNE2Q96FN4 548 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF641Q96N77 438 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 BTBD1Q9H0C5 482 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR2AG1Q9H205 316 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 PCDHAC2Q9Y5I4 1007 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 LGR5O75473 907 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 APOL3O95236 402 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 EFR3AQ14156 821 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 LRRC32Q14392 662 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 PRAMEF13Q5VWM6 474 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 TPGS2Q68CL5 300 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR13C4Q8NGS5 318 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 FUZQ9BT04 418 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 HPF1Q9NWY4 346 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
CSPG4P11-201ENST00000560634 DLX3O60479 287 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 NIPSNAP2O75323 286 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PIGRP01833 764 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 LMO2P25791 158 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 DCKP27707 260 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 IRF9Q00978 393 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF33AQ06730 810 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PYURFQ96I23 114 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZSCAN5AQ9BUG6 496 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 NUDT15Q9NV35 164 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF358Q9NW07 568 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 GDAP2Q9NXN4 497 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PRELID1Q9Y255 219 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ARL5AQ9Y689 179 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PDLIM1O00151 329 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 BCAS2O75934 225 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ERP29P30040 261 aaKnown RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 CEP97Q8IW35 865 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 HCAR2Q8TDS4 363 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 TSPEARQ8WU66 669 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 SMPDL3AQ92484 453 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PMEPA1Q969W9 287 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 KCNC2Q96PR1 638 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 BCL9LQ86UU0 1499 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 GNB5O14775 395 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC31A1O15431 190 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ALPPL2P10696 532 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 MAPK3P27361 379 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 TM4SF1P30408 202 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ALG1LQ6GMV1 187 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ANO7Q6IWH7 933 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 CAMKVQ8NCB2 501 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF420Q8TAQ5 688 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 AKAP1Q92667 903 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ADAD1Q96M93 576 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms