RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ARF3P61204 181 aaPredicted RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 TAP2Q03519 686 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 INPP5JQ15735 1006 aaPredicted RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 RBBP7Q16576 425 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 GARNL3Q5VVW2 1013 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 PRAMEF13Q5VWM6 474 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 IGFL3Q6UXB1 125 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 CYHR1Q6ZMK1 362 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 UBE2R2Q712K3 238 aaPredicted RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 AGGF1Q8N302 714 aaeCLIP16.95■□□□□ 0.3
TPM1-218ENST00000559281 METTL27Q8N6F8 245 aaPredicted RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 GIMAP7Q8NHV1 300 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 CD200R1Q8TD46 325 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 MCOLN3Q8TDD5 553 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 ZNF480Q8WV37 535 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 SLCO2A1Q92959 643 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 MIEF2Q96C03 454 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 MVB12AQ96EY5 273 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 SOX17Q9H6I2 414 aaPredicted RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 TAS2R13Q9NYV9 303 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 MAP10Q9P2G4 905 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 PCYOX1Q9UHG3 505 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 TRMT6Q9UJA5 497 aaKnown RBP16.95■□□□□ 0.3
TPM1-218ENST00000559281 FBXL4Q9UKA2 621 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 B3GNT3Q9Y2A9 372 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 MED16Q9Y2X0 877 aa16.95■□□□□ 0.3
TPM1-218ENST00000559281 EZRP15311 586 aaKnown RBP16.94■□□□□ 0.3
TPM1-218ENST00000559281 HRH2P25021 359 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 YBX1P67809 324 aaKnown RBP16.94■□□□□ 0.3
TPM1-218ENST00000559281 MPP1Q00013 466 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 CRYMQ14894 314 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 PRTGQ2VWP7 1150 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 SPANXN3Q5MJ09 141 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 SYDE1Q6ZW31 735 aaPredicted RBP16.94■□□□□ 0.3
TPM1-218ENST00000559281 ADCK2Q7Z695 626 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 PAQR7Q86WK9 346 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 CPNE9Q8IYJ1 553 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 IQCKQ8N0W5 287 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 CSNK1A1LQ8N752 337 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 C2CD4AQ8NCU7 369 aaPredicted RBP16.94■□□□□ 0.3
TPM1-218ENST00000559281 STT3BQ8TCJ2 826 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 RUNDC3BQ96NL0 473 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 CRB3Q9BUF7 120 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 SLC29A3Q9BZD2 475 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 DDX47Q9H0S4 455 aaKnown RBP16.94■□□□□ 0.3
TPM1-218ENST00000559281 ABCF3Q9NUQ8 709 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 CTSFQ9UBX1 484 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 HS3ST3B1Q9Y662 390 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 HECTD1Q9ULT8 2610 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 MED13Q9UHV7 2174 aa16.94■□□□□ 0.3
TPM1-218ENST00000559281 CLEC18AA5D8T8 446 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 SOCS6O14544 535 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 F7P08709 466 aaPredicted RBP16.93■□□□□ 0.3
TPM1-218ENST00000559281 ZGLP1P0C6A0 271 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 FBLP22087 321 aaKnown RBP16.93■□□□□ 0.3
TPM1-218ENST00000559281 DHX9Q08211 1270 aaKnown RBP16.93■□□□□ 0.3
TPM1-218ENST00000559281 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 ZNF425Q6IV72 752 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 KIRREL2Q6UWL6 708 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 CLEC18BQ6UXF7 455 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 SHISA6Q6ZSJ9 500 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 KIAA0408Q6ZU52 694 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 PDIK1LQ8N165 341 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 CLEC18CQ8NCF0 446 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 PPFIBP2Q8ND30 876 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 OR2A5Q96R48 311 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 YIPF2Q9BWQ6 316 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 PCBD2Q9H0N5 130 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 LUZP4Q9P127 313 aa16.93■□□□□ 0.3
TPM1-218ENST00000559281 RP1L1Q8IWN7 2480 aaPredicted RBP16.93■□□□□ 0.3
TPM1-218ENST00000559281 IGKV1-8A0A0C4DH67 115 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 NRP2O60462 931 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 C8GP07360 202 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 ANXA5P08758 320 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 HIST1H2AGP0C0S8 130 aaPredicted RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 HIST1H2ADP20671 130 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 GNLYP22749 145 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 KLC1Q07866 573 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 NDUFA9Q16795 377 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 BBS9Q3SYG4 887 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 PLEKHN1Q494U1 663 aaPredicted RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 FHL5Q5TD97 284 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 AGAP7PQ5VUJ5 663 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 PIWIL4Q7Z3Z4 852 aaKnown RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 MYO1HQ8N1T3 1032 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 Q8NA96 180 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 HIST1H2AHQ96KK5 128 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 C10orf90Q96M02 699 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 AGAP4Q96P64 663 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 HIST1H2AJQ99878 128 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 H2AFJQ9BTM1 129 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 ILKAPQ9H0C8 392 aaPredicted RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 PPANQ9NQ55 473 aaKnown RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 CCDC177Q9NQR7 707 aaPredicted RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 TMEM184CQ9NVA4 438 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 C3orf18Q9UK00 162 aa16.92■□□□□ 0.3
TPM1-218ENST00000559281 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
TPM1-218ENST00000559281 IGLV3-12A0A075B6K2 115 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms