RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CPNE7Q9UBL6 633 aa10□□□□□ -0.81
TPM1-212ENST00000558347 BSNQ9UPA5 3926 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 TEX51A0A1B0GUA7 166 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 OR5K4A6NMS3 321 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 TARM1B6A8C7 271 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 PRAMEF1O95521 474 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 BAG2O95816 211 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 RPL10P27635 214 aaKnown RBP9.99□□□□□ -0.81
TPM1-212ENST00000558347 PIK3R1P27986 724 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 SLC19A1P41440 591 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 PPM1FP49593 454 aaPredicted RBP9.99□□□□□ -0.81
TPM1-212ENST00000558347 DNAJB13P59910 316 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 IRF9Q00978 393 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 POU4F1Q01851 419 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 TBL3Q12788 808 aaKnown RBP9.99□□□□□ -0.81
TPM1-212ENST00000558347 TRA2AQ13595 282 aaKnown RBP eCLIP9.99□□□□□ -0.81
TPM1-212ENST00000558347 GTF2H3Q13889 308 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 SLC9B1Q4ZJI4 515 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 ZRANB3Q5FWF4 1079 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 ZNF789Q5FWF6 425 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 ZFP1Q6P2D0 407 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 CNSTQ6PJW8 725 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 FRMD7Q6ZUT3 714 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 RAPH1Q70E73 1250 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 ZFAND4Q86XD8 727 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 PDSS2Q86YH6 399 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 TRAPPC5Q8IUR0 188 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 PIANPQ8IYJ0 282 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 DEFB107AQ8IZN7 70 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 POU5F2Q8N7G0 328 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 DDHD1Q8NEL9 900 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 OR10G6Q8NH81 332 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 NAT14Q8WUY8 206 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 NCSTNQ92542 709 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 LPGAT1Q92604 370 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 FAR2Q96K12 515 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 BTBD9Q96Q07 612 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 TTC1Q99614 292 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 KLHL4Q9C0H6 718 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 ASB8Q9H765 288 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 OCIAD1Q9NX40 245 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 C6orf203Q9P0P8 240 aaPredicted RBP9.99□□□□□ -0.81
TPM1-212ENST00000558347 ZNF624Q9P2J8 865 aaPredicted RBP9.99□□□□□ -0.81
TPM1-212ENST00000558347 SLC39A10Q9ULF5 831 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 POMPQ9Y244 141 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 COMMD10Q9Y6G5 202 aa9.99□□□□□ -0.81
TPM1-212ENST00000558347 SDK2Q58EX2 2172 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 FAM95CA0A1B0GW59 222 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 OR52A4PA6NMU1 304 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 A8MU76 341 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 PDZK1P1A8MUH7 402 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 K7ENP7 123 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 ATXN7O15265 892 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 EFSO43281 561 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 ZBTB14O43829 449 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 SLC35E2BP0CK96 405 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 PRSS56P0CW18 603 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 LIPCP11150 499 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 XRCC1P18887 633 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 CD9P21926 228 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 MAPK9P45984 424 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 EPHA4P54764 986 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 RAB10P61026 200 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 VAC14Q08AM6 782 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 USP10Q14694 798 aaKnown RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 SNAP47Q5SQN1 464 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 LDLRAP1Q5SW96 308 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 GPRC6AQ5T6X5 926 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 VWA5B1Q5TIE3 1220 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 LRRC8EQ6NSJ5 796 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 FAM45BPQ6NSW5 357 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 ZNF549Q6P9A3 640 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 INO80CQ6PI98 192 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 WDR74Q6RFH5 385 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 PIWIL4Q7Z3Z4 852 aaKnown RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 LDB1Q86U70 411 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 TMEM151AQ8N4L1 468 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 RASGEF1AQ8N9B8 481 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 FAM45AQ8TCE6 357 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 SNRNP27Q8WVK2 155 aaKnown RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 SH3KBP1Q96B97 665 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 ULK4Q96C45 1275 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 CCDC126Q96EE4 140 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 TSPAN17Q96FV3 270 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 CCNL2Q96S94 520 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 AARSD1Q9BTE6 412 aaKnown RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 CAB39LQ9H9S4 337 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 SMOXQ9NWM0 555 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 AKAP7Q9P0M2 348 aaPredicted RBP9.98□□□□□ -0.81
TPM1-212ENST00000558347 CDYLQ9Y232 598 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 WDR37Q9Y2I8 494 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 ACOT9Q9Y305 439 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 AHCTF1Q8WYP5 2266 aa9.98□□□□□ -0.81
TPM1-212ENST00000558347 IGLV3-16A0A075B6K0 115 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 LILRA5A6NI73 299 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 OR2AG2A6NM03 316 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TRPC5OSA6NMA1 111 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms