RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NUP210LQ5VU65 1888 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 IRAK1BP1Q5VVH5 260 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 FCRL6Q6DN72 434 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 FAAH2Q6GMR7 532 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 FAM180BQ6P0A1 224 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 SARM1Q6SZW1 724 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 SASS6Q6UVJ0 657 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 KIRREL2Q6UWL6 708 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 LINC00696Q6ZRV3 163 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 SHISA6Q6ZSJ9 500 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 FKBP9P1Q75LS8 142 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 MRGPRGQ86SM5 289 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF808Q8N4W9 903 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 DTWD1Q8N5C7 304 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 LRRN4CLQ8ND94 238 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 CATSPER1Q8NEC5 780 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 C1orf162Q8NEQ5 155 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 IPMKQ8NFU5 416 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 OR1N1Q8NGS0 311 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 FLVCR1-AS1Q8TAF5 88 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 PPP1R14AQ96A00 147 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 NACC2Q96BF6 587 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 DCUN1D1Q96GG9 259 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 OXNAD1Q96HP4 312 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 THOC3Q96J01 351 aaKnown RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 OR2A14Q96R47 310 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 TAAR6Q96RI8 345 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 MESP1Q9BRJ9 268 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 BHLHE41Q9C0J9 482 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 LHPPQ9H008 270 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 EPS8L2Q9H6S3 715 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 MVB12BQ9H7P6 319 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 COG4Q9H9E3 785 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 CHST11Q9NPF2 352 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 TXLNGQ9NUQ3 528 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 IRAK4Q9NWZ3 460 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 MKS1Q9NXB0 559 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 SPHK1Q9NYA1 384 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 CTTNBP2NLQ9P2B4 639 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 ICKQ9UPZ9 632 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 HS3ST3B1Q9Y662 390 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 MAP1AP78559 2803 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 PCNX1Q96RV3 2341 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ANKRD12Q6UB98 2062 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TRGV8A0A0C4DH27 118 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 A0A0J9YY10 115 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 C17orf113A0A1B0GUU1 675 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 A0A1B0GX78 115 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TCRBV16S1A1N1A0A5B0 115 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 C19orf84I3L1E1 186 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CCL21O00585 134 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ULK1O75385 1050 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SRP72O76094 671 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 KLHL18O94889 574 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 UNC5CO95185 931 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CNOT4O95628 575 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SERPING1P05155 500 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CHRM5P08912 532 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TPBGLP0DKB5 382 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 RALBP11234 206 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ATP1B2P14415 290 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ACPPP15309 386 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ZFXP17010 805 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ARNTP27540 789 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NOS3P29474 1203 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TNNT3P45378 269 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CD151P48509 253 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 KRTAP10-9P60411 292 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 XIAPP98170 497 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 HYAL2Q12891 473 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 MFAP5Q13361 173 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 BOP1Q14137 746 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NFKBIBQ15653 356 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NKG7Q16617 165 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 VWA2Q5GFL6 755 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 INTS11Q5TA45 600 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 RPUSD3Q6P087 351 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ALKBH5Q6P6C2 394 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TLDC1Q6P9B6 456 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ISLR2Q6UXK2 745 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 GFRALQ6UXV0 394 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SPNS3Q6ZMD2 512 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TTLL10Q6ZVT0 673 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 MICALCLQ6ZW33 695 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 COX15Q7KZN9 410 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 HOOK3Q86VS8 718 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 VSIG1Q86XK7 387 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 RFX6Q8HWS3 928 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SULF2Q8IWU5 870 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 FAM20CQ8IXL6 584 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF567Q8N184 647 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 DNAJC22Q8N4W6 341 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 OR11G2Q8NGC1 345 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 OR4K2Q8NGD2 314 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 OR5AR1Q8NGP9 310 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 WFDC12Q8WWY7 111 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NR4A3Q92570 626 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms