RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ASF1AQ9Y294 204 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 PCYT1BQ9Y5K3 369 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 HEBP2Q9Y5Z4 205 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 PIKFYVEQ9Y2I7 2098 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 CELSR2Q9HCU4 2923 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 ZNF839A8K0R7 811 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 PDZK1P1A8MUH7 402 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 K7EPI3 171 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 KATNA1O75449 491 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 STK16O75716 305 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 SIX3O95343 332 aaPredicted RBP14□□□□□ -0.17
SHMT2-208ENST00000553868 FUCA1P04066 466 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 WT1P19544 449 aaPredicted RBP14□□□□□ -0.17
SHMT2-208ENST00000553868 GGT5P36269 586 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 HSD17B2P37059 387 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 RPL14P50914 215 aaKnown RBP14□□□□□ -0.17
SHMT2-208ENST00000553868 PKNOX1P55347 436 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 CLCQ05315 142 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 CES4AQ5XG92 561 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 CAPRIN2Q6IMN6 1127 aaKnown RBP14□□□□□ -0.17
SHMT2-208ENST00000553868 WASH2PQ6VEQ5 465 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 LRRC70Q7Z2Q7 622 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 VASH2Q86V25 355 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 TBC1D21Q8IYX1 336 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 ARL14Q8N4G2 192 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 PHC3Q8NDX5 983 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 IFI44Q8TCB0 444 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 TSACCQ96A04 125 aaPredicted RBP14□□□□□ -0.17
SHMT2-208ENST00000553868 SORT1Q99523 831 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 GSDMCQ9BYG8 508 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 TRIT1Q9H3H1 467 aaKnown RBP14□□□□□ -0.17
SHMT2-208ENST00000553868 NPHS2Q9NP85 383 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 WASH6PQ9NQA3 447 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 PCTPQ9UKL6 214 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 ARL2BPQ9Y2Y0 163 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 CRYBG3Q68DQ2 2970 aa14□□□□□ -0.17
SHMT2-208ENST00000553868 PRR19A6NJB7 356 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 MYO1CO00159 1063 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 E2F3O00716 465 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 CCNT2O60583 730 aaKnown RBP13.99□□□□□ -0.17
SHMT2-208ENST00000553868 CHRNGP07510 517 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 CTSEP14091 401 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 SLC2A4P14672 509 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 NDUFS1P28331 727 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 BDKRB1P46663 353 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 HSPA7P48741 367 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 AGTR2P50052 363 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 FZD2Q14332 565 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 KRT33BQ14525 404 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 RBBP7Q16576 425 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 TPRG1LQ5T0D9 272 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 ZNF787Q6DD87 383 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 EFL1Q7Z2Z2 1120 aaKnown RBP13.99□□□□□ -0.17
SHMT2-208ENST00000553868 CUZD1Q86UP6 607 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 SLC22A18ASQ8N1D0 253 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 OR9A1PQ8NGU1 263 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 SEC16BQ96JE7 1060 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 MAGEB10Q96LZ2 347 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-208ENST00000553868 RMDN2Q96LZ7 410 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 C12orf66Q96MD2 445 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 PHF12Q96QT6 1004 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 HGH1Q9BTY7 390 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 C20orf27Q9GZN8 174 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 STN1Q9H668 368 aaKnown RBP13.99□□□□□ -0.17
SHMT2-208ENST00000553868 MVB12BQ9H7P6 319 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 ZNF395Q9H8N7 513 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-208ENST00000553868 PFDN4Q9NQP4 134 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 SPATA7Q9P0W8 599 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 POLG2Q9UHN1 485 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 LNPEPQ9UIQ6 1025 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 PSMD13Q9UNM6 376 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 PCDHGA4Q9Y5G9 962 aa13.99□□□□□ -0.17
SHMT2-208ENST00000553868 RP1P56715 2156 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 TAPBPO15533 448 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 CRCPO75575 148 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 OTCP00480 354 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 GP1BAP07359 652 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 KITP10721 976 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 EPB42P16452 691 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 MPSTP25325 297 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 CASRP41180 1078 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ACTR1BP42025 376 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ACTR1AP61163 376 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 CTBSQ01459 385 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 EIF2B5Q13144 721 aaKnown RBP13.98□□□□□ -0.17
SHMT2-208ENST00000553868 GTF2H2Q13888 395 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ARHGAP19Q14CB8 494 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.98□□□□□ -0.17
SHMT2-208ENST00000553868 SH2D4BQ5SQS7 431 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 CGB2Q6NT52 195 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 GTF2H2CQ6P1K8 395 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ABRAXAS1Q6UWZ7 409 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 KLHDC8AQ8IYD2 350 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 PHACTR4Q8IZ21 702 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 TEX9Q8N6V9 391 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ZNF781Q8N8C0 355 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 OR5K2Q8NHB8 316 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 TRPC4APQ8TEL6 797 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ATP6V1E2Q96A05 226 aa13.98□□□□□ -0.17
SHMT2-208ENST00000553868 ZNF382Q96SR6 550 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms