RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 NEK10Q6ZWH5 1172 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 ARHGEF39Q8N4T4 335 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 LRRC57Q8N9N7 239 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 DNAAF3Q8N9W5 541 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 DNAJB8Q8NHS0 232 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 SLC35B2Q8TB61 432 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 RAD51AP1Q96B01 352 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 CABS1Q96KC9 395 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 TTC1Q99614 292 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 DPH7Q9BTV6 452 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 ZNF700Q9H0M5 742 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 C14orf105Q9NVL8 296 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 TINAGQ9UJW2 476 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 RIMKLBQ9ULI2 386 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 RUVBL1Q9Y265 456 aaKnown RBP13.74□□□□□ -0.21
USP15-206ENST00000546718 MAP1AP78559 2803 aaPredicted RBP13.74□□□□□ -0.21
USP15-206ENST00000546718 NIPBLQ6KC79 2804 aaeCLIP13.74□□□□□ -0.21
USP15-206ENST00000546718 CACNA1CQ13936 2221 aa13.74□□□□□ -0.21
USP15-206ENST00000546718 IGKV1-8A0A0C4DH67 115 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 A0A0U1RQJ8 604 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 TCRBV7S2A1N4TA0A589 114 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 H0YGG7 62 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
USP15-206ENST00000546718 PRAMEF2O60811 474 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 UQCRHP07919 91 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 ERVK-10P10266 1014 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 CXCR2P25025 360 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 SLC26A3P40879 764 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 EMP3P54852 163 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 ARF3P61204 181 aaPredicted RBP13.73□□□□□ -0.21
USP15-206ENST00000546718 SNRPNP63162 240 aaKnown RBP13.73□□□□□ -0.21
USP15-206ENST00000546718 C3AR1Q16581 482 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 SYT16Q17RD7 645 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 FASTKD1Q53R41 847 aaKnown RBP13.73□□□□□ -0.21
USP15-206ENST00000546718 FBXO42Q6P3S6 717 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 MVB12AQ96EY5 273 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 IMMP1LQ96LU5 166 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 ACAT2Q9BWD1 397 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 TGIF2Q9GZN2 237 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 ITGB1BP2Q9UKP3 347 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 DNHD1Q96M86 4753 aa13.73□□□□□ -0.21
USP15-206ENST00000546718 ZNF469Q96JG9 3925 aaPredicted RBP13.73□□□□□ -0.21
USP15-206ENST00000546718 GRID2IPA4D2P6 1211 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 PSMD3O43242 534 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 FOXS1O43638 330 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 WFS1O76024 890 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 SUN1O94901 812 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 HEXBP07686 556 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 PRAMEP78395 509 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 ZNF33BQ06732 778 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 SPA17Q15506 151 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 TTC23LQ6PF05 361 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 XKRXQ6PP77 449 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 TMEM205Q6UW68 189 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 ZC3H7AQ8IWR0 971 aaKnown RBP13.72□□□□□ -0.21
USP15-206ENST00000546718 CCDC170Q8IYT3 715 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 SHISA5Q8N114 240 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 CSNK1A1LQ8N752 337 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 ADAMTS18Q8TE60 1221 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 SKA2Q8WVK7 121 aaPredicted RBP13.72□□□□□ -0.21
USP15-206ENST00000546718 ATG4AQ8WYN0 398 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 MKKSQ9NPJ1 570 aaPredicted RBP13.72□□□□□ -0.21
USP15-206ENST00000546718 CATSPERZQ9NTU4 200 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 TCAF1Q9Y4C2 921 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 MED13LQ71F56 2210 aa13.72□□□□□ -0.21
USP15-206ENST00000546718 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 ERGP11308 486 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 AGAP20933 346 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 ADRA1DP25100 572 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 CETN2P41208 172 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 KIR3DL1P43629 444 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 MAT1AQ00266 395 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 RBPJQ06330 500 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 AARS2Q5JTZ9 985 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 ABHD17BQ5VST6 288 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 PTRHD1Q6GMV3 140 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 SUSD1Q6UWL2 747 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 NCCRP1Q6ZVX7 275 aaPredicted RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 PAQR7Q86WK9 346 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 RAB42Q8N4Z0 105 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 MMABQ96EY8 250 aaPredicted RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 YIPF2Q9BWQ6 316 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 LACRTQ9GZZ8 138 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 ETNK1Q9HBU6 452 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 SPATA7Q9P0W8 599 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 PACSIN2Q9UNF0 486 aaPredicted RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 CDC14AQ9UNH5 594 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 ZNF835Q9Y2P0 537 aa13.71□□□□□ -0.21
USP15-206ENST00000546718 REXO2Q9Y3B8 237 aaKnown RBP13.71□□□□□ -0.21
USP15-206ENST00000546718 A0A0A6YYC8 382 aaPredicted RBP13.7□□□□□ -0.22
USP15-206ENST00000546718 GOLGA6L9A6NEM1 432 aa13.7□□□□□ -0.22
USP15-206ENST00000546718 I3L1I5 382 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms