RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SLC22A15Q8IZD6 547 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 RPRMLQ8N4K4 120 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 LILRB4Q8NHJ6 448 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 CFAP61Q8NHU2 1237 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 LKAAEAR1Q8TD35 194 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 NANOS1Q8WY41 292 aaKnown RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 CTNNBL1Q8WYA6 563 aaPredicted RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 NINJ1Q92982 152 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 ZUFSPQ96AP4 578 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 CDKN2AIPNLQ96HQ2 116 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 MIPEPQ99797 713 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 C19orf43Q9BQ61 176 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TUBB6Q9BUF5 446 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TGIF2Q9GZN2 237 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 LMBRD1Q9NUN5 540 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 C14orf105Q9NVL8 296 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 NLE1Q9NVX2 485 aaPredicted RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 ZNF358Q9NW07 568 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 KCNN3Q9UGI6 736 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 LCMT1Q9UIC8 334 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TEKT2Q9UIF3 430 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TRHDEQ9UKU6 1024 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 RNF6Q9Y252 685 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 KLK4Q9Y5K2 254 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 FAM169AQ9Y6X4 670 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 A0A0U1RQJ8 604 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 KIAA1324LA8MWY0 1029 aaPredicted RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 H0YGG7 62 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 RASGRF2O14827 1237 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 FOXS1O43638 330 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 OR1I1O60431 355 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 NEURL1O76050 574 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 FTH1P02794 183 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 FOSL1P15407 271 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 CCR7P32248 378 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 ARF3P61204 181 aaPredicted RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 AP2B1P63010 937 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 ADAM8P78325 824 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 TFDP2Q14188 446 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 ITIH4Q14624 930 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 NR1I3Q14994 352 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 HKDC1Q2TB90 917 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 SKOR2Q2VWA4 1001 aaPredicted RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 BTBD16Q32M84 506 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 CCSMST1Q4G0I0 132 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 FILIP1LQ4L180 1135 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 LRRC38Q5VT99 294 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 CES4AQ5XG92 561 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 FBXO42Q6P3S6 717 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 PACS1Q6VY07 963 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 CD163Q86VB7 1156 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 DCUN1D3Q8IWE4 304 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 TAB3Q8N5C8 712 aaPredicted RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 CPSF7Q8N684 471 aaKnown RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 OR2L3Q8NG85 312 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 SLC35G2Q8TBE7 412 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 P3H4Q92791 437 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 HDAC10Q969S8 669 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 CABS1Q96KC9 395 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 ZNF354BQ96LW1 612 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 UTP23Q9BRU9 249 aaKnown RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 MKKSQ9NPJ1 570 aaPredicted RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 DNAJB12Q9NXW2 375 aaKnown RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 ST6GALNAC2Q9UJ37 374 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 MKL2Q9ULH7 1088 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 RUVBL1Q9Y265 456 aaKnown RBP8.88□□□□□ -0.99
CHD4-212ENST00000545083 PLEKHA6Q9Y2H5 1048 aa8.88□□□□□ -0.99
CHD4-212ENST00000545083 ATRQ13535 2644 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 SCN2AQ99250 2005 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 hCG_1818297A0A087WSY0 165 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 A0A1W2PPV9 198 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 OR2A25A4D2G3 310 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 OR2W5A6NFC9 320 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 HACD1B0YJ81 288 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 GPC4O75487 556 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ZWINTO95229 277 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 FKBP9O95302 570 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 SP1P08047 785 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 C8orf89P0DMQ9 161 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ERVK-10P10266 1014 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 CD46P15529 392 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ZNF24P17028 368 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 TPH1P17752 444 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 CHRNB4P30926 498 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 FOXN2P32314 431 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ZBED6P86452 979 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 PLOD1Q02809 727 aaPredicted RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 HSPA14Q0VDF9 509 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 MYBPHQ13203 477 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ZNF468Q5VIY5 522 aaPredicted RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 PLAG1Q6DJT9 500 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ITPRIPL1Q6GPH6 555 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 SLC25A25Q6KCM7 469 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 CPEB2Q7Z5Q1 589 aaKnown RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 CCDC71Q8IV32 467 aaPredicted RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 ARHGEF39Q8N4T4 335 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms