RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CPSF7Q8N684 471 aaKnown RBP26.84■■□□□ 1.89
CCM2-218ENST00000541586 LMNTD1Q8N9Z9 388 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 TUBGCP3Q96CW5 907 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 IL17FQ96PD4 163 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 PFDN4Q9NQP4 134 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 GIMAP2Q9UG22 337 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 ARID1BQ8NFD5 2236 aaPredicted RBP26.83■■□□□ 1.89
CCM2-218ENST00000541586 E7ENX8 843 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 FLRT2O43155 660 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 VPS4BO75351 444 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 TAP2Q03519 686 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 FASTKQ14296 549 aaKnown RBP26.83■■□□□ 1.89
CCM2-218ENST00000541586 GGTA1PQ4G0N0 100 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 CAPN13Q6MZZ7 669 aaPredicted RBP26.83■■□□□ 1.89
CCM2-218ENST00000541586 ABRAXAS1Q6UWZ7 409 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 L3MBTL4Q8NA19 623 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 FERD3LQ96RJ6 166 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 SGPP1Q9BX95 441 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 SLC29A3Q9BZD2 475 aa26.83■■□□□ 1.89
CCM2-218ENST00000541586 IMP3Q9NV31 184 aaKnown RBP26.83■■□□□ 1.89
CCM2-218ENST00000541586 RRP15Q9Y3B9 282 aaKnown RBP26.83■■□□□ 1.89
CCM2-218ENST00000541586 UBDO15205 165 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 ABRAXAS2Q15018 415 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 ZCCHC8Q6NZY4 707 aaKnown RBP26.82■■□□□ 1.88
CCM2-218ENST00000541586 APOLD1Q96LR9 279 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 PCOLCE2Q9UKZ9 415 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 COPG1Q9Y678 874 aaKnown RBP26.82■■□□□ 1.88
CCM2-218ENST00000541586 CAPN7Q9Y6W3 813 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 KCNE1BA0A087WTH5 132 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 A6NCN8 305 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 MAZP56270 477 aaKnown RBP26.82■■□□□ 1.88
CCM2-218ENST00000541586 KLF10Q13118 480 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 CHIT1Q13231 466 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 BIRC2Q13490 618 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 CPSF6Q16630 551 aaKnown RBP eCLIP26.82■■□□□ 1.88
CCM2-218ENST00000541586 INAVAQ3KP66 663 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 WASH2PQ6VEQ5 465 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 KYQ8NBH2 561 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 OR2T11Q8NH01 316 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 HBEGFQ99075 208 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 WASH6PQ9NQA3 447 aa26.82■■□□□ 1.88
CCM2-218ENST00000541586 GOLGA4Q13439 2230 aaKnown RBP26.81■■□□□ 1.88
CCM2-218ENST00000541586 E7EQ34 232 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 NOBOXO60393 691 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 WFS1O76024 890 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 ERGP11308 486 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 CALB2P22676 271 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 TSTA3Q13630 321 aaPredicted RBP26.81■■□□□ 1.88
CCM2-218ENST00000541586 RPE65Q16518 533 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 OGFOD3Q6PK18 319 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 NAXDQ8IW45 347 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 SLC35F3Q8IY50 421 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 ARL10Q8N8L6 244 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 SLC37A2Q8TED4 501 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 FAM122AQ96E09 287 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 MENTQ9BUN1 341 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 TAGLN3Q9UI15 199 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 LNPEPQ9UIQ6 1025 aa26.81■■□□□ 1.88
CCM2-218ENST00000541586 PRAMEF33A0A0G2JMD5 474 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 MANBAO00462 879 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 ESRRAP11474 423 aaPredicted RBP26.8■■□□□ 1.88
CCM2-218ENST00000541586 SLC2A4P14672 509 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 IRF8Q02556 426 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 ACTN3Q08043 901 aaPredicted RBP26.8■■□□□ 1.88
CCM2-218ENST00000541586 KRT33BQ14525 404 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 ARHGAP19Q14CB8 494 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 SUSD1Q6UWL2 747 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 RNF165Q6ZSG1 346 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 Q6ZSR9 355 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 TRIM48Q8IWZ4 208 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 GPR156Q8NFN8 814 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 CXorf40BQ96DE9 158 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 NRTNQ99748 197 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 CCDC177Q9NQR7 707 aaPredicted RBP26.8■■□□□ 1.88
CCM2-218ENST00000541586 FARSBQ9NSD9 589 aaKnown RBP26.8■■□□□ 1.88
CCM2-218ENST00000541586 RIC8BQ9NVN3 520 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 ZNF624Q9P2J8 865 aaPredicted RBP26.8■■□□□ 1.88
CCM2-218ENST00000541586 KCNE2Q9Y6J6 123 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 ZNF292O60281 2723 aa26.8■■□□□ 1.88
CCM2-218ENST00000541586 OR5K4A6NMS3 321 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 UGDHO60701 494 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 PEX11AO75192 247 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 ULK1O75385 1050 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 ALDOCP09972 364 aaKnown RBP26.79■■□□□ 1.88
CCM2-218ENST00000541586 PRR35P0CG20 571 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 NPPBP16860 134 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 LBPP18428 481 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 SLC19A1P41440 591 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 PCDH1Q08174 1060 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 XKR6Q5GH73 641 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 LIPJQ5W064 366 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 HOMEZQ8IX15 550 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 SFRP1Q8N474 314 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 ARL14Q8N4G2 192 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 SLC7A6OSQ96CW6 309 aaPredicted RBP26.79■■□□□ 1.88
CCM2-218ENST00000541586 MAGEB10Q96LZ2 347 aaPredicted RBP26.79■■□□□ 1.88
CCM2-218ENST00000541586 GPRC5BQ9NZH0 403 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 SPATA7Q9P0W8 599 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 CLGNO14967 610 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 LDOC1O95751 146 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms