RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SRRQ9GZT4 340 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 CARS2Q9HA77 564 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SMURF1Q9HCE7 757 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 DYRK4Q9NR20 520 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MCUBQ9NWR8 336 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 GPRC5BQ9NZH0 403 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 REV1Q9UBZ9 1251 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 GIMAP2Q9UG22 337 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TINAGQ9UJW2 476 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TBX21Q9UL17 535 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 CDH9Q9ULB4 789 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SMIM28A0A1B0GU29 152 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 NT5C1B-RDH14C9J2C7 533 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 GNGT2O14610 69 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TNNC2P02585 160 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ITGAMP11215 1152 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 EPHA5P54756 1037 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 RUNX1T1Q06455 604 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MRPL28Q13084 256 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SP140Q13342 867 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SIM2Q14190 667 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF460Q14592 562 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ZBTB6Q15916 424 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 FBXO43Q4G163 708 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 KDM4DQ6B0I6 523 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TRILQ7L0X0 811 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 XYLT1Q86Y38 959 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TIGD4Q8IY51 512 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR151Q8TDV0 419 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 LINC01599Q8WXQ3 324 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 FCGR1BQ92637 280 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 PHF21AQ96BD5 680 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR22Q99680 433 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 RACGAP1Q9H0H5 632 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 RANBP3Q9H6Z4 567 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 HEXA-AS1Q9H8Q6 139 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 AKTIPQ9H8T0 292 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TRIM45Q9H8W5 580 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 EML4Q9HC35 981 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 CYP4F12Q9HCS2 524 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC52A3Q9NQ40 469 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ABCB8Q9NUT2 735 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MIOSQ9NXC5 875 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 RDH8Q9NYR8 311 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SIX4Q9UIU6 781 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ACSL5Q9ULC5 683 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 VPS9D1Q9Y2B5 631 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ORC6Q9Y5N6 252 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 PIPSLA2A3N6 862 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 LRRC72A6NJI9 287 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 PRPSAP2O60256 369 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 APOC1P02654 83 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 CLTBP09497 229 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 CYP4B1P13584 511 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 ITGB8P26012 769 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 BMP8BP34820 402 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 HSD17B2P37059 387 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 KCNC1P48547 511 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 LIMK1P53667 647 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 BCAT1P54687 386 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 DNAJB13P59910 316 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF169Q14929 603 aaPredicted RBP9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 TCTN1Q2MV58 587 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 KLHL12Q53G59 568 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 XKR4Q5GH76 650 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 ZC3H12BQ5HYM0 836 aaKnown RBP9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 TOR1AIP1Q5JTV8 583 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR158Q5T848 1215 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 ANKRD54Q6NXT1 300 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 ARHGAP36Q6ZRI8 547 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 BMP8AQ7Z5Y6 402 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 DEFB128Q7Z7B8 93 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 GALNT5Q7Z7M9 940 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 DTWD1Q8N5C7 304 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 CAMKK1Q8N5S9 505 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 COLGALT1Q8NBJ5 622 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 C3orf58Q8NDZ4 430 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 ENKURQ8TC29 256 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 MRPL57Q9BQC6 102 aaKnown RBP9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 LDAHQ9H6V9 325 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 RGS18Q9NS28 235 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 MAGEL2Q9UJ55 1249 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 PCDHGA9Q9Y5G4 932 aaKnown RBP9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 FKBP7Q9Y680 259 aa9.21□□□□□ -0.93
CTNNA1-243ENST00000540387 A0A075B6Q4 140 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 ZCWPW2A0A1B0GU75 182 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 A0A1B0GVM2 712 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 PTGESO14684 152 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 MYL12BO14950 172 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 KIAA0513O60268 411 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 PDE9AO76083 593 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 TSPAN12O95859 305 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 TPOP07202 933 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 MYL12AP19105 171 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 KCNA5P22460 613 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 ATP5F1P24539 256 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 POU1F1P28069 291 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 DCTP40126 519 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 OLIG2Q13516 323 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms