RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 ERGP11308 486 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 SLC26A3P40879 764 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 KIR3DL1P43629 444 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 RWDD2BP57060 319 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 ARF3P61204 181 aaPredicted RBP16.64■□□□□ 0.25
LTBR-206ENST00000536876 SYT16Q17RD7 645 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 MUM1Q2TAK8 710 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 HKDC1Q2TB90 917 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 TMEM205Q6UW68 189 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 OR4L1Q8NH43 312 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 DNAJB8Q8NHS0 232 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 IMMP1LQ96LU5 166 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 ZFYVE21Q9BQ24 234 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 TMEM121Q9BTD3 319 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 P2RY12Q9H244 342 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 TRPC4Q9UBN4 977 aa16.64■□□□□ 0.25
LTBR-206ENST00000536876 ZNF469Q96JG9 3925 aaPredicted RBP16.64■□□□□ 0.25
LTBR-206ENST00000536876 OR5H15A6NDH6 313 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 P2RX6O15547 441 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 FOXS1O43638 330 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 CRYABP02511 175 aaKnown RBP16.63■□□□□ 0.25
LTBR-206ENST00000536876 EMP3P54852 163 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 CDH17Q12864 832 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.63■□□□□ 0.25
LTBR-206ENST00000536876 ACBD4Q8NC06 268 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 ADAMTS18Q8TE60 1221 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 RAD51AP1Q96B01 352 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 CABS1Q96KC9 395 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 ALS2CR12Q96Q35 445 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 DPH7Q9BTV6 452 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 TGIF2Q9GZN2 237 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 C14orf105Q9NVL8 296 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 ZNF835Q9Y2P0 537 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 REXO2Q9Y3B8 237 aaKnown RBP16.63■□□□□ 0.25
LTBR-206ENST00000536876 TCAF1Q9Y4C2 921 aa16.63■□□□□ 0.25
LTBR-206ENST00000536876 GRID2IPA4D2P6 1211 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 SUN1O94901 812 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 GBX1Q14549 363 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.62■□□□□ 0.25
LTBR-206ENST00000536876 MTFR2Q6P444 385 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 XKRXQ6PP77 449 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 PAQR7Q86WK9 346 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 NPAS2Q99743 824 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 ACAT2Q9BWD1 397 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 HES7Q9BYE0 225 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 TTC7AQ9ULT0 858 aaPredicted RBP16.62■□□□□ 0.25
LTBR-206ENST00000536876 HCFC1P51610 2035 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 SCN3AQ9NY46 2000 aa16.62■□□□□ 0.25
LTBR-206ENST00000536876 PRMT5O14744 637 aaPredicted RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 ZNF189O75820 626 aaPredicted RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 WFS1O76024 890 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 AGAP20933 346 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 ST13P50502 369 aaKnown RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 MAT1AQ00266 395 aaKnown RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 TMED2Q15363 201 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 FASTKD1Q53R41 847 aaKnown RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 CTSL3PQ5NE16 218 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 ZNF425Q6IV72 752 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 Q6ZPB1 254 aaPredicted RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 LANCL3Q6ZV70 420 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 LINC00523Q86TU6 105 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 SPNS2Q8IVW8 549 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 CHERPQ8IWX8 916 aaKnown RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 CSNK1A1LQ8N752 337 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 MDS2Q8NDY4 140 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 OR6P1Q8NGX9 317 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 MVB12AQ96EY5 273 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 SIGLEC12Q96PQ1 595 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 OR2A5Q96R48 311 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 PLCD4Q9BRC7 762 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 TSSK1BQ9BXA7 367 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 ETNK1Q9HBU6 452 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 MKKSQ9NPJ1 570 aaPredicted RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 SPATA7Q9P0W8 599 aa16.61■□□□□ 0.25
LTBR-206ENST00000536876 TSR3Q9UJK0 312 aaKnown RBP16.61■□□□□ 0.25
LTBR-206ENST00000536876 IGHV3-20A0A0C4DH32 117 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ARHGEF33A8MVX0 844 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 PSMD3O43242 534 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ZNHIT1O43257 154 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 MAN1A2O60476 641 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 HEXBP07686 556 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ERVK-10P10266 1014 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 CXCR2P25025 360 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ADRA1DP25100 572 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ZNF33BQ06732 778 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ZNF766Q5HY98 468 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 FCRLBQ6BAA4 426 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 SUSD1Q6UWL2 747 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 SPNS3Q6ZMD2 512 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 PRUNE1Q86TP1 453 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 BEST3Q8N1M1 668 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 DNAAF3Q8N9W5 541 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 ATG4AQ8WYN0 398 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 MTFMTQ96DP5 389 aaKnown RBP16.6■□□□□ 0.25
LTBR-206ENST00000536876 GPR137Q96N19 417 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
LTBR-206ENST00000536876 TSPAN10Q9H1Z9 355 aaPredicted RBP16.6■□□□□ 0.25
LTBR-206ENST00000536876 CATSPERZQ9NTU4 200 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms