RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PCDHGA3Q9Y5H0 932 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 ANKRD11Q6UB99 2663 aaPredicted RBP11.58□□□□□ -0.56
CHD4-203ENST00000535717 APC2O95996 2303 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 OR2A25A4D2G3 310 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 SYCE1LA8MT33 242 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 H7BY64 318 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 MAP2K7O14733 419 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 KLK8O60259 260 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 CTSBP07858 339 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 SBK3P0C264 359 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 FGF5P12034 268 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 SLC5A2P31639 672 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 HSPA7P48741 367 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 AGTR2P50052 363 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 ERVPABLB-1P60509 514 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 CBX1P83916 185 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 DEFB110Q30KQ9 67 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 TBC1D25Q3MII6 688 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 KRT71Q3SY84 523 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 TMEM164Q5U3C3 297 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 ZNF425Q6IV72 752 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 C16orf46Q6P387 395 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 UNQ6494/PRO21346Q6UXR6 183 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 CEACAM20Q6UY09 585 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 LCA5Q86VQ0 697 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 PAQR7Q86WK9 346 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 C17orf64Q86WR6 236 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 OR1L3Q8NH93 324 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 ESAMQ96AP7 390 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 PRAP1Q96NZ9 151 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 MRPL57Q9BQC6 102 aaKnown RBP11.58□□□□□ -0.56
CHD4-203ENST00000535717 PLCD4Q9BRC7 762 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 HAUS8Q9BT25 410 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 ASPSCR1Q9BZE9 553 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 B3GNT4Q9C0J1 378 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 MRPL46Q9H2W6 279 aaKnown RBP11.58□□□□□ -0.56
CHD4-203ENST00000535717 CCDC86Q9H6F5 360 aaKnown RBP11.58□□□□□ -0.56
CHD4-203ENST00000535717 THSD1Q9NS62 852 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 TMEM216Q9P0N5 145 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
CHD4-203ENST00000535717 ANKMY1Q9P2S6 941 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 XPR1Q9UBH6 696 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 DKK4Q9UBT3 224 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 RARRES3Q9UL19 164 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 SNX7Q9UNH6 387 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 ASB1Q9Y576 335 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 HEATR5BQ9P2D3 2071 aa11.58□□□□□ -0.56
CHD4-203ENST00000535717 TPRP12270 2363 aaKnown RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 TMEM150CB9EJG8 249 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 TK2O00142 265 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 STK16O75716 305 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 IPO13O94829 963 aaKnown RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 WDR47O94967 919 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 TIAF1O95411 115 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 GSTA1P08263 222 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 CDH1P12830 882 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 GFAPP14136 432 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 KRT4P19013 534 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 SLC18A2Q05940 514 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 NAA25Q14CX7 972 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 PFKFB4Q16877 469 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD4-203ENST00000535717 PWWP2BQ6NUJ5 590 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 FBXO42Q6P3S6 717 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 LRIG3Q6UXM1 1119 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 TRABD2AQ86V40 505 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 BPHLQ86WA6 291 aaPredicted RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 PPP1R3BQ86XI6 285 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 MCATQ8IVS2 390 aaKnown RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 C4orf33Q8N1A6 199 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 OR8K5Q8NH50 307 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 UBTD2Q8WUN7 234 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 NEIL2Q969S2 332 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 RNF31Q96EP0 1072 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 ZNF578Q96N58 590 aaPredicted RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 FCRL4Q96PJ5 515 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 TEFMQ96QE5 360 aaKnown RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 ZPBPQ9BS86 351 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 CD244Q9BZW8 370 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 CNOT10Q9H9A5 744 aaKnown RBP11.57□□□□□ -0.56
CHD4-203ENST00000535717 FANCEQ9HB96 536 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 TMEM184CQ9NVA4 438 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 DCDC2Q9UHG0 476 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 PILRAQ9UKJ1 303 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 PLCL2Q9UPR0 1127 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 SPTBP11277 2137 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 AHCTF1Q8WYP5 2266 aa11.57□□□□□ -0.56
CHD4-203ENST00000535717 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 LRRC14BA6NHZ5 514 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 H3BMH7 237 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 HAT1O14929 419 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 CCNT2O60583 730 aaKnown RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 H2AFXP16104 143 aaPredicted RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 ZNF28P17035 718 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 HRH2P25021 359 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 CRHR1P34998 444 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 ALDH18A1P54886 795 aaKnown RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 CSNK1G2P78368 415 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms