RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 IKZF3Q9UKT9 509 aa13.85□□□□□ -0.19
PUF60-220ENST00000532884 SNX7Q9UNH6 387 aa13.85□□□□□ -0.19
PUF60-220ENST00000532884 SRPK3Q9UPE1 567 aa13.85□□□□□ -0.19
PUF60-220ENST00000532884 SNRNP200O75643 2136 aaKnown RBP13.85□□□□□ -0.19
PUF60-220ENST00000532884 OR2A25A4D2G3 310 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 NPEPPSL1A6NEC2 478 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 H0YGG7 62 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 PHGDHO43175 533 aaKnown RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 SRPX2O60687 465 aaPredicted RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 CAPN1P07384 714 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 ZNF37AP17032 561 aaPredicted RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 STX2P32856 288 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 GP5P40197 560 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 ARF3P61204 181 aaPredicted RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 POU4F1Q01851 419 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 IL10RAQ13651 578 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 GRM7Q14831 915 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 NAA25Q14CX7 972 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 EFTUD2Q15029 972 aaKnown RBP eCLIP13.84□□□□□ -0.199e-7■■■■■ 28.5
PUF60-220ENST00000532884 NKAIN1Q4KMZ8 207 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 TCTE1Q5JU00 501 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 PRAMEF13Q5VWM6 474 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 FAM198BQ6UWH4 519 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 PAQR7Q86WK9 346 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 NKAPQ8N5F7 415 aaKnown RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 TTC29Q8NA56 475 aaPredicted RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 LSM14AQ8ND56 463 aaKnown RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 ANKRD49Q8WVL7 239 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 APOBEC4Q8WW27 367 aaKnown RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 SEC14L1Q92503 715 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 PYCR2Q96C36 320 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 WBP1Q96G27 269 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 GBP5Q96PP8 586 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 RBBP8Q99708 897 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 ZFYVE21Q9BQ24 234 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 DPH2Q9BQC3 489 aaPredicted RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 MCMBPQ9BTE3 642 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 PHACTR1Q9C0D0 580 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 CUTCQ9NTM9 273 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 MTRF1LQ9UGC7 380 aaKnown RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 POLHQ9Y253 713 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 KLK4Q9Y5K2 254 aa13.84□□□□□ -0.19
PUF60-220ENST00000532884 SMG1Q96Q15 3661 aaKnown RBP13.84□□□□□ -0.19
PUF60-220ENST00000532884 HYKKA2RU49 373 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 TK2O00142 265 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 STATHP02808 62 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 RAB40ALP0C0E4 278 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 ARSFP54793 590 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 POLE2P56282 527 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 FOXL2P58012 376 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 ABATP80404 500 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 NCF4Q15080 339 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 ZNF385CQ66K41 422 aaPredicted RBP13.83□□□□□ -0.2
PUF60-220ENST00000532884 CYS1Q717R9 158 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 RNF44Q7L0R7 432 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 SYVN1Q86TM6 617 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 DTWD1Q8N5C7 304 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 CEP112Q8N8E3 955 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.83□□□□□ -0.2
PUF60-220ENST00000532884 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
PUF60-220ENST00000532884 TSPAN17Q96FV3 270 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 PDLIM5Q96HC4 596 aaKnown RBP13.83□□□□□ -0.2
PUF60-220ENST00000532884 CTNNAL1Q9UBT7 734 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 TCFL5Q9UL49 500 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 SH2B3Q9UQQ2 575 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 MAN2B2Q9Y2E5 1009 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 MAU2Q9Y6X3 613 aa13.83□□□□□ -0.2
PUF60-220ENST00000532884 A0A1B0GX78 115 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 HAT1O14929 419 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 C1QAP02745 245 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 CCDC166P0CW27 439 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 STMN1P16949 149 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 OTX2P32243 289 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 SPRP35270 261 aaPredicted RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 OR1D4P47884 311 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 AP1S2P56377 157 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 SLMAPQ14BN4 828 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 TSNQ15631 228 aaKnown RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 UAP1Q16222 522 aaPredicted RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 UGT8Q16880 541 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 FAM214AQ32MH5 1076 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 CRTC2Q53ET0 693 aaPredicted RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 GLE1Q53GS7 698 aaKnown RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 UBAP2Q5T6F2 1119 aaKnown RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 GRTP1Q5TC63 336 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 ZNF425Q6IV72 752 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 CAPN13Q6MZZ7 669 aaPredicted RBP13.82□□□□□ -0.2
PUF60-220ENST00000532884 SBSNQ6UWP8 590 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 FRA10AC1Q70Z53 315 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 C17orf64Q86WR6 236 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 CSNK1A1LQ8N752 337 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 CABS1Q96KC9 395 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 ZNF285Q96NJ3 590 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 FMO2Q99518 471 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 GPR22Q99680 433 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 EGFL8Q99944 293 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 PCBD2Q9H0N5 130 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 SYNPO2LQ9H987 977 aa13.82□□□□□ -0.2
PUF60-220ENST00000532884 ANKMY1Q9P2S6 941 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms