RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FRG2BQ96QU4 278 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 EPYCQ99645 322 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 YIPF4Q9BSR8 244 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TBL1XR1Q9BZK7 514 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 HSD3B7Q9H2F3 369 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PRAMEF33A0A0G2JMD5 474 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 EFCAB9A8MZ26 197 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 C9J4A7 227 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PRAMEF10O60809 474 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 HMGN1P05114 100 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 DHPSP49366 369 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ATP4BP51164 291 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 VLDLRP98155 873 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 DAG1Q14118 895 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TIGD6Q17RP2 521 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 FRMD7Q6ZUT3 714 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 HFE2Q6ZVN8 426 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 C2CD4AQ8NCU7 369 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 OR52E4Q8NGH9 312 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 RAB2BQ8WUD1 216 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SLC5A11Q8WWX8 675 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SLC25A36Q96CQ1 311 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 LRRC46Q96FV0 321 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 FBXL18Q96ME1 805 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MCCC2Q9HCC0 563 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TRNAU1APQ9NX07 287 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 CLDND1Q9NY35 253 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 DNAJB4Q9UDY4 337 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ZDHHC2Q9UIJ5 367 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PPM1HQ9ULR3 514 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF670-ZNF695F2Z2N8 137 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PRAMEF11O60813 436 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 FOXN2P32314 431 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SLC11A1P49279 550 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SLC18A1P54219 525 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 KLF1Q13351 362 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.097e-7■■□□□ 12.2
CTNND1-227ENST00000530748 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 OR4F3Q6IEY1 312 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TIFABQ6ZNK6 161 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PIM3Q86V86 326 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 OR5AK3PQ8NH89 298 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SMPDL3BQ92485 455 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 KAT2AQ92830 837 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PNPLA2Q96AD5 504 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 POLR2J3Q9H1A7 115 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MARCH7Q9H992 704 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 RIMKLBQ9ULI2 386 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 INSL5Q9Y5Q6 135 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 FABP12A6NFH5 140 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 WASHC1A8K0Z3 465 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF487B1APH4 448 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 WASH3PC4AMC7 463 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MATN1P21941 496 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PDHA2P29803 388 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SEPHS1P49903 392 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 KLHL26Q53HC5 615 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PDSS1Q5T2R2 415 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 DNM1P34Q6PK57 102 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 WASH2PQ6VEQ5 465 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF783Q6ZMS7 281 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF627Q7L945 461 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 C1orf52Q8N6N3 182 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 OR4F6Q8NGB9 312 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 DNAJA4Q8WW22 397 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TMCO6Q96DC7 493 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 NDC1Q9BTX1 674 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 CXorf21Q9HAI6 301 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ALKBH4Q9NXW9 302 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MOCS1Q9NZB8 636 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TBC1D24Q9ULP9 559 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PHF24Q9UPV7 400 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 NPIPA5E9PKD4 350 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 CLIC1O00299 241 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 ADAMTS3O15072 1205 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 EBLN1P0CF75 366 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MAP3K8P41279 467 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 GALK1P51570 392 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 GPR68Q15743 365 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 Q6ZVU0 165 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 P4HA3Q7Z4N8 544 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 PRSS58Q8IYP2 241 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TBX5Q99593 518 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 CD244Q9BZW8 370 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MINDY3Q9H8M7 445 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 CD320Q9NPF0 282 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SRRDQ9UH36 339 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 NPIPA1Q9UND3 350 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 SETD1AO15047 1707 aaKnown RBP8.26□□□□□ -1.09
CTNND1-227ENST00000530748 LRP6O75581 1613 aa8.26□□□□□ -1.09
CTNND1-227ENST00000530748 MMP20O60882 483 aa8.25□□□□□ -1.09
CTNND1-227ENST00000530748 SOD2P04179 222 aa8.25□□□□□ -1.09
CTNND1-227ENST00000530748 CD2P06729 351 aa8.25□□□□□ -1.09
CTNND1-227ENST00000530748 PGAM2P15259 253 aa8.25□□□□□ -1.09
CTNND1-227ENST00000530748 DNAJB13P59910 316 aa8.25□□□□□ -1.09
CTNND1-227ENST00000530748 GPR153Q6NV75 609 aa8.25□□□□□ -1.09
CTNND1-227ENST00000530748 TPRG1Q6ZUI0 275 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms