RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 BNC2Q6ZN30 1099 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-210ENST00000527027 GDF7Q7Z4P5 450 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 MAGEC3Q8TD91 643 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 MVB12AQ96EY5 273 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 LACRTQ9GZZ8 138 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 P2RY12Q9H244 342 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 CATSPERZQ9NTU4 200 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 MARCH4Q9P2E8 410 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-210ENST00000527027 SEC14L3Q9UDX4 400 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 TCAF1Q9Y4C2 921 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 F8P00451 2351 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 C2CD3Q4AC94 2353 aa15.32■□□□□ 0.04
PTPRU-210ENST00000527027 TCRBV7S2A1N4TA0A589 114 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 KRT87PA6NCN2 255 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 E7EVH7 732 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 CD3EAPO15446 510 aaKnown RBP15.31■□□□□ 0.04
PTPRU-210ENST00000527027 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
PTPRU-210ENST00000527027 WDPCPO95876 746 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 F10P00742 488 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 HEXBP07686 556 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 CELA2AP08217 269 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 MYBL2P10244 700 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 ICAM2P13598 275 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 MST1P26927 711 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 CMPK1P30085 196 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 CA7P43166 264 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 AP2B1P63010 937 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 YBX1P67809 324 aaKnown RBP15.31■□□□□ 0.04
PTPRU-210ENST00000527027 EEF1A2Q05639 463 aaKnown RBP15.31■□□□□ 0.04
PTPRU-210ENST00000527027 FAAH2Q6GMR7 532 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 RPTNQ6XPR3 784 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 OTOAQ7RTW8 1153 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 SUN3Q8TAQ9 357 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 FOPNLQ96NB1 174 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 DPH7Q9BTV6 452 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 TGIF2Q9GZN2 237 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 RNF32Q9H0A6 362 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 C14orf105Q9NVL8 296 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 STMN3Q9NZ72 180 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 SPATA7Q9P0W8 599 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 GNPTGQ9UJJ9 305 aa15.31■□□□□ 0.04
PTPRU-210ENST00000527027 RUVBL2Q9Y230 463 aaKnown RBP15.31■□□□□ 0.04
PTPRU-210ENST00000527027 REXO2Q9Y3B8 237 aaKnown RBP15.31■□□□□ 0.04
PTPRU-210ENST00000527027 LOC102723996A0A087X1L8 192 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 SOWAHDA6NJG2 315 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 MIF4GDA9UHW6 222 aaKnown RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 PHF2O75151 1096 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 VPS26AO75436 327 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 ITGAMP11215 1152 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 COX6B1P14854 86 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 HIVEP1P15822 2718 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 SLC26A3P40879 764 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 RBPJQ06330 500 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 FASTKQ14296 549 aaKnown RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 ABHD17BQ5VST6 288 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 HIBCHQ6NVY1 386 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 XKRXQ6PP77 449 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 LRRC6Q86X45 466 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 AMER3Q8N944 861 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 MMABQ96EY8 250 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 LURAP1Q96LR2 239 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 ACAT2Q9BWD1 397 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 TRIM5Q9C035 493 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 ZNF700Q9H0M5 742 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 MKKSQ9NPJ1 570 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 CHRAC1Q9NRG0 131 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 PKDREJQ9NTG1 2253 aa15.3■□□□□ 0.04
PTPRU-210ENST00000527027 PACSIN2Q9UNF0 486 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 SETD2Q9BYW2 2564 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-210ENST00000527027 CCDC168Q8NDH2 2452 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 OR5H15A6NDH6 313 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 FFAR3O14843 346 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 GPR42O15529 346 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 PRAMEF2O60811 474 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 NDUFS3O75489 264 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 IFNB1P01574 187 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPRU-210ENST00000527027 SRSF11Q05519 484 aaKnown RBP15.29■□□□□ 0.04
PTPRU-210ENST00000527027 PCOLCEQ15113 449 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 OASLQ15646 514 aaKnown RBP15.29■□□□□ 0.04
PTPRU-210ENST00000527027 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 GARNL3Q5VVW2 1013 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 TMEM205Q6UW68 189 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 CSNK1A1LQ8N752 337 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 PPHLN1Q8NEY8 458 aaKnown RBP15.29■□□□□ 0.04
PTPRU-210ENST00000527027 ATG4AQ8WYN0 398 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 IMMP1LQ96LU5 166 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 PANX2Q96RD6 677 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 PLCD4Q9BRC7 762 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 MRPS30Q9NP92 439 aaKnown RBP15.29■□□□□ 0.04
PTPRU-210ENST00000527027 RAB6BQ9NRW1 208 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 RUVBL1Q9Y265 456 aaKnown RBP15.29■□□□□ 0.04
PTPRU-210ENST00000527027 AKAP9Q99996 3911 aa15.29■□□□□ 0.04
PTPRU-210ENST00000527027 FOXS1O43638 330 aa15.28■□□□□ 0.04
PTPRU-210ENST00000527027 MATN4O95460 622 aa15.28■□□□□ 0.04
PTPRU-210ENST00000527027 SNRPB2P08579 225 aaKnown RBP15.28■□□□□ 0.04
PTPRU-210ENST00000527027 ANXA5P08758 320 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms