RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 CCT8P50990 548 aa16.95■□□□□ 0.3
TRAM1-205ENST00000521425 RPS14P62263 151 aaKnown RBP16.95■□□□□ 0.3
TRAM1-205ENST00000521425 RAET1GQ6H3X3 334 aa16.95■□□□□ 0.3
TRAM1-205ENST00000521425 PDE12Q6L8Q7 609 aaKnown RBP16.95■□□□□ 0.3
TRAM1-205ENST00000521425 ZFAND4Q86XD8 727 aa16.95■□□□□ 0.3
TRAM1-205ENST00000521425 AP2M1Q96CW1 435 aa16.95■□□□□ 0.3
TRAM1-205ENST00000521425 RHNO1Q9BSD3 238 aa16.95■□□□□ 0.3
TRAM1-205ENST00000521425 TSEN34Q9BSV6 310 aaKnown RBP16.95■□□□□ 0.3
TRAM1-205ENST00000521425 SPTBP11277 2137 aa16.95■□□□□ 0.3
TRAM1-205ENST00000521425 E7EQ34 232 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 PITPNM1O00562 1244 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 KPNA5O15131 536 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 WISP3O95389 354 aaPredicted RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ELFN1P0C7U0 828 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 POU1F1P28069 291 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MC1RQ01726 317 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 LRRC26Q2I0M4 334 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ZXDCQ2QGD7 858 aaPredicted RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 AASDHQ4L235 1098 aaPredicted RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 CHERPQ8IWX8 916 aaKnown RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MINDY1Q8N5J2 469 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ATG16L2Q8NAA4 619 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ITPKCQ96DU7 683 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 REXO4Q9GZR2 422 aaKnown RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MIR1-1HGQ9H1L0 117 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 CTPS2Q9NRF8 586 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ERGIC3Q9Y282 383 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ZNF236Q9UL36 1845 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 RTCAO00442 366 aaKnown RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 CXCR6O00574 342 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MMP20O60882 483 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 SLC16A8O95907 504 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 NAT2P11245 290 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 CRATP43155 626 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 HSPA13P48723 471 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 WDR5P61964 334 aaKnown RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 PHC1P78364 1004 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ACSM2AQ08AH3 577 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ACSM2BQ68CK6 577 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ZNF740Q8NDX6 193 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 DOK4Q8TEW6 326 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 TOR3AQ9H497 397 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 C1orf109Q9NX04 203 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MRPS23Q9Y3D9 190 aaKnown RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 A0A087WXM4 84 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ELOVL7A1L3X0 281 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 BBIP1A8MTZ0 92 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 SLC22A2O15244 555 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 DEAF1O75398 565 aaPredicted RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MFN2O95140 757 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ALPPL2P10696 532 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 RFC2P35250 354 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ALDH3B2P48448 385 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 ZBED5Q49AG3 693 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 INO80DQ53TQ3 878 aaPredicted RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 TPRG1Q6ZUI0 275 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 KLHDC8BQ8IXV7 354 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 JPH3Q8WXH2 748 aaPredicted RBP16.94■□□□□ 0.3
TRAM1-205ENST00000521425 MYRFLQ96LU7 910 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 PPP3R2Q96LZ3 170 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 TMEM175Q9BSA9 504 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 P2RY12Q9H244 342 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 GIMAP4Q9NUV9 329 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 TDP1Q9NUW8 608 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 SLC25A37Q9NYZ2 338 aa16.94■□□□□ 0.3
TRAM1-205ENST00000521425 LINC00854A0A1B0GVQ3 168 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 STX16O14662 325 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 RHOP08100 348 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 SMARCB1Q12824 385 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 RAB33AQ14088 237 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 CERS6Q6ZMG9 384 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 SGK2Q9HBY8 427 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 DDX28Q9NUL7 540 aaKnown RBP16.93■□□□□ 0.3
TRAM1-205ENST00000521425 KIF17Q9P2E2 1029 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 PCDHB1Q9Y5F3 818 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 TNFRSF10AO00220 468 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 TLL1O43897 1013 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 ACPPP15309 386 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 HOXB8P17481 243 aaPredicted RBP16.93■□□□□ 0.3
TRAM1-205ENST00000521425 SHMT2P34897 504 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 PIGAP37287 484 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 SUOXP51687 545 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 CNTN1Q12860 1018 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 ZNF284Q2VY69 593 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 CATSPEREQ5SY80 951 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 TMEM215Q68D42 235 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 DLEU7Q6UYE1 221 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 C1orf52Q8N6N3 182 aaKnown RBP16.93■□□□□ 0.3
TRAM1-205ENST00000521425 POF1BQ8WVV4 589 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 ALG14Q96F25 216 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 ZNF597Q96LX8 424 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 AGPAT4Q9NRZ5 378 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 RHCGQ9UBD6 479 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 ANKRD36A6QL64 1941 aa16.93■□□□□ 0.3
TRAM1-205ENST00000521425 RPS26P62854 115 aaKnown RBP16.92■□□□□ 0.3
TRAM1-205ENST00000521425 TRAP1Q12931 704 aaKnown RBP16.92■□□□□ 0.3
TRAM1-205ENST00000521425 CARD16Q5EG05 197 aa16.92■□□□□ 0.3
TRAM1-205ENST00000521425 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
TRAM1-205ENST00000521425 ACDQ96AP0 544 aa16.92■□□□□ 0.3
TRAM1-205ENST00000521425 ZNF583Q96ND8 569 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms