RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 QSOX1O00391 747 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 FANCGO15287 622 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 FOXS1O43638 330 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 SEC24DO94855 1032 aaPredicted RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 ZRANB2O95218 330 aaKnown RBP eCLIP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 APOC2P02655 101 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 OR56A5P0C7T3 313 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 MSNP26038 577 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 DNAJA1P31689 397 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 SLC26A3P40879 764 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 UBASH3AP57075 661 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 ARF3P61204 181 aaPredicted RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 ALDH6A1Q02252 535 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 PLOD1Q02809 727 aaPredicted RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 KRTCAP3Q53RY4 240 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 LANCL3Q6ZV70 420 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 KATNAL2Q8IYT4 538 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 MARVELD2Q8N4S9 558 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 OR2A1Q8NGT9 310 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 ACTL9Q8TC94 416 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 PHF10Q8WUB8 498 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 STYXQ8WUJ0 223 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 KRT35Q92764 455 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 SCMH1Q96GD3 660 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 CABS1Q96KC9 395 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 SPATA13Q96N96 652 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 CHP1Q99653 195 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 TGIF2Q9GZN2 237 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 RUVBL2Q9Y230 463 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 RUVBL1Q9Y265 456 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 ASB1Q9Y576 335 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 ALG6Q9Y672 507 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 NFS1Q9Y697 457 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 MROH6A6NGR9 719 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 TTI1O43156 1089 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 ASNA1O43681 348 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 SLCO2B1O94956 709 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 CD96P40200 585 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 BDKRB1P46663 353 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 IST1P53990 364 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 MAT1AQ00266 395 aaKnown RBP18■□□□□ 0.47
HMGCS1-206ENST00000511774 TFF3Q07654 80 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 PRPSAP1Q14558 356 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 SEMA3AQ14563 771 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 HKDC1Q2TB90 917 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 ACER2Q5QJU3 275 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 SPINK14Q6IE38 97 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 H3F3CQ6NXT2 135 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 C14orf105Q9NVL8 296 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 HRH3Q9Y5N1 445 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 DNAJC13O75165 2243 aa18■□□□□ 0.47
HMGCS1-206ENST00000511774 RCCD1A6NED2 376 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 OR2W5A6NFC9 320 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 E9PLN8 166 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 FASTKQ14296 549 aaKnown RBP17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 CCDC38Q502W7 563 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 UNC5DQ6UXZ4 953 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 LUZP1Q86V48 1076 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 TGIF2LYQ8IUE0 185 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 KRT222Q8N1A0 295 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 CA5BP1Q8WTZ4 195 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 DNAJC7Q99615 494 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 ZFYVE21Q9BQ24 234 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 VKORC1Q9BQB6 163 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 TUBB6Q9BUF5 446 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 CXXC4Q9H2H0 198 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 SLC2A6Q9UGQ3 507 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 FEZ2Q9UHY8 353 aaPredicted RBP17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 MKL2Q9ULH7 1088 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 PPT2Q9UMR5 302 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 R3HDM2Q9Y2K5 976 aaKnown RBP17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 SCN3AQ9NY46 2000 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 JMJD1CQ15652 2540 aa17.99■□□□□ 0.47
HMGCS1-206ENST00000511774 NKX2-6A6NCS4 301 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 AKR1B10O60218 316 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 FKBP9O95302 570 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 ABOP16442 354 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 TCEAL1Q15170 157 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 OR1C1Q15619 314 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 CRLF3Q8IUI8 442 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 RCOR2Q8IZ40 523 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 DNAAF3Q8N9W5 541 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 OR13J1Q8NGT2 312 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 IQCDQ96DY2 449 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 MMABQ96EY8 250 aaPredicted RBP17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 UCK2Q9BZX2 261 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 VN1R1Q9GZP7 353 aa17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 MKKSQ9NPJ1 570 aaPredicted RBP17.98■□□□□ 0.47
HMGCS1-206ENST00000511774 ZNF407Q9C0G0 2248 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 A0A0A6YYC8 382 aaPredicted RBP17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 IGKV1-8A0A0C4DH67 115 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 I3L1I5 382 aaPredicted RBP17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 METTL18O95568 372 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 MYBL2P10244 700 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 ERVK-10P10266 1014 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 RBP3P10745 1247 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 ICAM2P13598 275 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 AOAHP28039 575 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 EIF3EP60228 445 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms