RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 C4orf51C9J302 202 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 E5RI56 91 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 E7ENX8 843 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 TMX2-CTNND1H3BSU7 103 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 KLK10O43240 276 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 VPS26AO75436 327 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 SPAG6O75602 509 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 KIAA0754O94854 1291 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZBTB11O95625 1053 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 FURINP09958 794 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 RHOXF2BP0C7M4 288 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC35E2BP0CK96 405 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 CDH3P22223 829 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 RBMS1P29558 406 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 STAT5AP42229 794 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 GRIA3P42263 894 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 MAGEA12P43365 314 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 RPS18P62269 152 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 CYP4F2P78329 520 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 TAP2Q03519 686 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 OR4D1Q15615 310 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 UAP1Q16222 522 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC5A12Q1EHB4 618 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 FRMPD2BQ6IN97 320 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF425Q6IV72 752 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM45BPQ6NSW5 357 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF449Q6P9G9 518 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF517Q6ZMY9 492 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 PAQR7Q86WK9 346 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 PLD3Q8IV08 490 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 AMER2Q8N7J2 671 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 GALNT6Q8NCL4 622 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 BBOF1Q8ND07 529 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF248Q8NDW4 579 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 OR2L3Q8NG85 312 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 OR9A1PQ8NGU1 263 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 KIF18AQ8NI77 898 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM45AQ8TCE6 357 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 PYROXD1Q8WU10 500 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 CT55Q8WUE5 264 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 INPP5DQ92835 1189 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZDHHC12Q96GR4 267 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 SEC16BQ96JE7 1060 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 C10orf90Q96M02 699 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 MIPEPQ99797 713 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 RHOXF2Q9BQY4 288 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 TMEM79Q9BSE2 394 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 B3GNT4Q9C0J1 378 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 SPRTNQ9H040 489 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 C1GALT1Q9NS00 363 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 FGF21Q9NSA1 209 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 OR6C2Q9NZP2 312 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 TRMT6Q9UJA5 497 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 NFU1Q9UMS0 254 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 MRPS2Q9Y399 296 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 UTP11Q9Y3A2 253 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 KLK4Q9Y5K2 254 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 COLEC10Q9Y6Z7 277 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 TLN1Q9Y490 2541 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 HEATR5BQ9P2D3 2071 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 LOC105369274A0A096LPK9 316 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 LOC102723532A0A0G2JNH3 316 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 OR2A25A4D2G3 310 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ISM1B1AKI9 464 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TMEM150CB9EJG8 249 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 KIF2AO00139 706 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 HAT1O14929 419 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ZBTB14O43829 449 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF500O60304 480 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ACSL3O95573 720 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 STATHP02808 62 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ALDOAP04075 364 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 NTRK1P04629 796 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ENO3P13929 434 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 CD1DP15813 335 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 EPORP19235 508 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 OAS2P29728 719 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 GP5P40197 560 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 MAP2K3P46734 347 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 KCNC1P48547 511 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PPM1FP49593 454 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PNLIPRP1P54315 467 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TUBB4BP68371 445 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 HSD11B2P80365 405 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PLOD1Q02809 727 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 FOXM1Q08050 763 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 IL10RAQ13651 578 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TUBB2AQ13885 445 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 KRT33BQ14525 404 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 KIR2DS3Q14952 304 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TSNQ15631 228 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PTCHD3Q3KNS1 767 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 FBXO48Q5FWF7 155 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ARSJQ5FYB0 599 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 UGT3A1Q6NUS8 523 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM199XQ6PEV8 388 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 UBE2R2Q712K3 238 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms