RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SLC1A6P48664 564 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 GFERP55789 205 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 IRF8Q02556 426 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 ARL13AQ5H913 290 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-230ENST00000491028 LIPJQ5W064 366 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 CES4AQ5XG92 561 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 ATG9BQ674R7 924 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 TMEM71Q6P5X7 295 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 NXPE4Q6UWF7 544 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 SLCO4C1Q6ZQN7 724 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 KIAA2013Q8IYS2 634 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 LSMEM2Q8N112 164 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 OR52B6Q8NGF0 335 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 AGAP11Q8TF27 550 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 GRAMD1AQ96CP6 724 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 PTCD3Q96EY7 689 aaKnown RBP17.93■□□□□ 0.46
MCF2L-230ENST00000491028 TGM7Q96PF1 710 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 GFM1Q96RP9 751 aaKnown RBP17.93■□□□□ 0.46
MCF2L-230ENST00000491028 EFCAB11Q9BUY7 163 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 SEMA6CQ9H3T2 930 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 ACTR8Q9H981 624 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 SLC6A20Q9NP91 592 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 TMEM184CQ9NVA4 438 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 TRPS1Q9UHF7 1281 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 SNX7Q9UNH6 387 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 SH2B3Q9UQQ2 575 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 RP1P56715 2156 aa17.93■□□□□ 0.46
MCF2L-230ENST00000491028 POLR3GO15318 223 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-230ENST00000491028 TOX3O15405 576 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CLDN9O95484 217 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 ESRRBO95718 433 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 TSPAN8P19075 237 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 ARL1P40616 181 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-230ENST00000491028 HNF4AP41235 474 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 GRIA3P42263 894 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CCR8P51685 355 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 PPP1CAP62136 330 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CFHR1Q03591 330 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CHIT1Q13231 466 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 LAPTM5Q13571 262 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 GGTA1PQ4G0N0 100 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 XKR6Q5GH73 641 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 KIAA1614Q5VZ46 1190 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 ZNF425Q6IV72 752 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 GPRIN3Q6ZVF9 776 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 PRSS42Q7Z5A4 293 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CUZD1Q86UP6 607 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 TRIM73Q86UV7 250 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CHCHD4Q8N4Q1 142 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 L3MBTL4Q8NA19 623 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 OR4F6Q8NGB9 312 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 OR4D9Q8NGE8 314 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 ZUFSPQ96AP4 578 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 NUDT22Q9BRQ3 303 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 DPH7Q9BTV6 452 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 MID1IP1Q9NPA3 183 aa17.92■□□□□ 0.46
MCF2L-230ENST00000491028 CUEDC1Q9NWM3 386 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-230ENST00000491028 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-230ENST00000491028 EP300Q09472 2414 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 IGKV1-8A0A0C4DH67 115 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 UBFD1O14562 309 aaKnown RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 ITM2AO43736 263 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SNRNP200O75643 2136 aaKnown RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 WFS1O76024 890 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 ENO1P06733 434 aaKnown RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 CHRNGP07510 517 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 CDK4P11802 303 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 MAGP20916 626 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 CXCR2P25025 360 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 ARRB2P32121 409 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 CCR10P46092 362 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 YBX1P67809 324 aaKnown RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SH3BP2P78314 561 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 E2F1Q01094 437 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 OCRLQ01968 901 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SPIDRQ14159 915 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 DOC2AQ14183 400 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 TRIP6Q15654 476 aaKnown RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 PAGE2BQ5JRK9 111 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 CATSPEREQ5SY80 951 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 GRHL2Q6ISB3 625 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 FAM92BQ6ZTR7 304 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 USP53Q70EK8 1073 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 MILR1Q7Z6M3 343 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SYVN1Q86TM6 617 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 FAM129CQ86XR2 697 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 OR4K1Q8NGD4 311 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 C7orf26Q96N11 449 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SORT1Q99523 831 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 MAP3K3Q99759 626 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 AIF1LQ9BQI0 150 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 PLCD4Q9BRC7 762 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 PITHD1Q9GZP4 211 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SYNDIG1Q9H7V2 258 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 SEMA5BQ9P283 1151 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 PDP2Q9P2J9 529 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 HAO1Q9UJM8 370 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 RAP2CQ9Y3L5 183 aa17.91■□□□□ 0.46
MCF2L-230ENST00000491028 ASXL3Q9C0F0 2248 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ZNF292O60281 2723 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms