RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PEX26Q7Z412 305 aa18.13■□□□□ 0.49
GGPS1-206ENST00000488594 MPP5Q8N3R9 675 aa18.13■□□□□ 0.49
GGPS1-206ENST00000488594 RNF214Q8ND24 703 aa18.13■□□□□ 0.49
GGPS1-206ENST00000488594 PPHLN1Q8NEY8 458 aaKnown RBP18.13■□□□□ 0.49
GGPS1-206ENST00000488594 CCDC120Q96HB5 630 aa18.13■□□□□ 0.49
GGPS1-206ENST00000488594 ETNK1Q9HBU6 452 aa18.13■□□□□ 0.49
GGPS1-206ENST00000488594 SEC14L3Q9UDX4 400 aa18.13■□□□□ 0.49
GGPS1-206ENST00000488594 A0A1W2PPV9 198 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 HEXBP07686 556 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 HTR1EP28566 365 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 CA7P43166 264 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 BDKRB1P46663 353 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 GARNL3Q5VVW2 1013 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 LDB1Q86U70 411 aaPredicted RBP18.12■□□□□ 0.49
GGPS1-206ENST00000488594 SYCE1Q8N0S2 351 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 DPH7Q9BTV6 452 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 YIPF2Q9BWQ6 316 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 TGIF2Q9GZN2 237 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 P2RY12Q9H244 342 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 MKKSQ9NPJ1 570 aaPredicted RBP18.12■□□□□ 0.49
GGPS1-206ENST00000488594 TEKT2Q9UIF3 430 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 NFS1Q9Y697 457 aa18.12■□□□□ 0.49
GGPS1-206ENST00000488594 LOC102723996A0A087X1L8 192 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 SOWAHDA6NJG2 315 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 H0YGG7 62 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 CD3EAPO15446 510 aaKnown RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 NRP2O60462 931 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 PRAMEF2O60811 474 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 WDPCPO95876 746 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 COX6B1P14854 86 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 RPS3P23396 243 aaKnown RBP eCLIP18.11■□□□□ 0.497e-7■■■■□ 25.3
GGPS1-206ENST00000488594 GRIA1P42261 906 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 CASP6P55212 293 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 ARF3P61204 181 aaPredicted RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 EEF1A2Q05639 463 aaKnown RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 SKOR2Q2VWA4 1001 aaPredicted RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 CCSMST1Q4G0I0 132 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 ABHD17BQ5VST6 288 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 FBXO42Q6P3S6 717 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 XKRXQ6PP77 449 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 CSNK1A1LQ8N752 337 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 PANX2Q96RD6 677 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 FRMD8P1Q9BZ68 369 aaPredicted RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 LACRTQ9GZZ8 138 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 ZNF700Q9H0M5 742 aa18.11■□□□□ 0.49
GGPS1-206ENST00000488594 UTP6Q9NYH9 597 aaKnown RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 MARCH4Q9P2E8 410 aaPredicted RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 STOX2Q9P2F5 926 aaPredicted RBP18.11■□□□□ 0.49
GGPS1-206ENST00000488594 OR5H15A6NDH6 313 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 NDUFS3O75489 264 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 ANXA5P08758 320 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 MST1P26927 711 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 SLC26A3P40879 764 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 LONRF1Q17RB8 773 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 HIBCHQ6NVY1 386 aaPredicted RBP18.1■□□□□ 0.49
GGPS1-206ENST00000488594 PLCD4Q9BRC7 762 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 TRIM5Q9C035 493 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 RAB6BQ9NRW1 208 aa18.1■□□□□ 0.49
GGPS1-206ENST00000488594 RUVBL2Q9Y230 463 aaKnown RBP18.1■□□□□ 0.49
GGPS1-206ENST00000488594 RUVBL1Q9Y265 456 aaKnown RBP18.1■□□□□ 0.49
GGPS1-206ENST00000488594 TCRBV7S2A1N4TA0A589 114 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 TXNDC9O14530 226 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 IFNB1P01574 187 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 PKMP14618 531 aaKnown RBP18.09■□□□□ 0.49
GGPS1-206ENST00000488594 ATP5DP30049 168 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 FASTKQ14296 549 aaKnown RBP18.09■□□□□ 0.49
GGPS1-206ENST00000488594 PCID2Q5JVF3 399 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 AMER3Q8N944 861 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 SMPDL3AQ92484 453 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 RERGQ96A58 199 aaPredicted RBP18.09■□□□□ 0.49
GGPS1-206ENST00000488594 MMABQ96EY8 250 aaPredicted RBP18.09■□□□□ 0.49
GGPS1-206ENST00000488594 LURAP1Q96LR2 239 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 TUBB6Q9BUF5 446 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 ACAT2Q9BWD1 397 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 MRPS30Q9NP92 439 aaKnown RBP18.09■□□□□ 0.49
GGPS1-206ENST00000488594 CHRAC1Q9NRG0 131 aa18.09■□□□□ 0.49
GGPS1-206ENST00000488594 REXO2Q9Y3B8 237 aaKnown RBP18.09■□□□□ 0.49
GGPS1-206ENST00000488594 KRT87PA6NCN2 255 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 MATN4O95460 622 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 F10P00742 488 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 APRTP07741 180 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 ITGAMP11215 1152 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 ERGP11308 486 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 AGAP20933 346 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 RPA3P35244 121 aaPredicted RBP18.08■□□□□ 0.49
GGPS1-206ENST00000488594 RELAQ04206 551 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 ARHGAP19Q14CB8 494 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 PCOLCEQ15113 449 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 OASLQ15646 514 aaKnown RBP18.08■□□□□ 0.49
GGPS1-206ENST00000488594 ANKRD20A4Q4UJ75 823 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 FAAH2Q6GMR7 532 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 MYO7BQ6PIF6 2116 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 TMEM205Q6UW68 189 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 OR9A1PQ8NGU1 263 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 ATG4AQ8WYN0 398 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 DRC3Q9H069 523 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 STMN3Q9NZ72 180 aa18.08■□□□□ 0.49
GGPS1-206ENST00000488594 PACSIN2Q9UNF0 486 aaPredicted RBP18.08■□□□□ 0.49
GGPS1-206ENST00000488594 H3BMM5 538 aa18.07■□□□□ 0.48
GGPS1-206ENST00000488594 FFAR3O14843 346 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms