RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ADGRE2Q9UHX3 823 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 ICKQ9UPZ9 632 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 MAU2Q9Y6X3 613 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF407Q9C0G0 2248 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 A0A0G2JNJ9 132 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 A0A1W2PPR1 153 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 CLDN4O14493 209 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 MATN3O15232 486 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 GPR39O43194 453 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 GOSR1O95249 250 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 MED26O95402 600 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 HLA-DQB2P05538 268 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 POLBP06746 335 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 H2AFZP0C0S5 128 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 CXCR2P25025 360 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 NSFP46459 744 aaKnown RBP11.04□□□□□ -0.64
TRIM56-204ENST00000487252 EMP2P54851 167 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 BOP1Q14137 746 aaKnown RBP11.04□□□□□ -0.64
TRIM56-204ENST00000487252 GRM7Q14831 915 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 DPYSL2Q16555 572 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF658BQ4V348 819 aaPredicted RBP11.04□□□□□ -0.64
TRIM56-204ENST00000487252 BCL7AQ4VC05 210 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 GLE1Q53GS7 698 aaKnown RBP11.04□□□□□ -0.64
TRIM56-204ENST00000487252 CATSPEREQ5SY80 951 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 GPRC6AQ5T6X5 926 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 HEPHL1Q6MZM0 1159 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 DNAJC24Q6P3W2 148 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 TMEM205Q6UW68 189 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 UNC5AQ6ZN44 842 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 H2AFVQ71UI9 128 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 HDXQ7Z353 690 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 HIPK1Q86Z02 1210 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 PRSS58Q8IYP2 241 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 ULK2Q8IYT8 1036 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 SPATA4Q8NEY3 305 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
TRIM56-204ENST00000487252 TUBB6Q9BUF5 446 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 GPR63Q9BZJ6 419 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 THAP2Q9H0W7 228 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 OR52A5Q9H2C5 316 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF304Q9HCX3 659 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 RBM22Q9NW64 420 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRIM56-204ENST00000487252 ANKRD10Q9NXR5 420 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 Q9UFV3 132 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 ALG6Q9Y672 507 aa11.04□□□□□ -0.64
TRIM56-204ENST00000487252 H3BRJ5 948 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 GAPDHSO14556 408 aaPredicted RBP11.03□□□□□ -0.64
TRIM56-204ENST00000487252 RASGRF2O14827 1237 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 AURKAO14965 403 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 NME2P1O60361 137 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 UGT1A9O60656 530 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 CHRM5P08912 532 aaPredicted RBP11.03□□□□□ -0.64
TRIM56-204ENST00000487252 TMEM253P0C7T8 217 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 UGT1A6P19224 532 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 TFEBP19484 476 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 UGT1A1P22309 533 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 NME2P22392 152 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 MIPP30301 263 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 HMGCLP35914 325 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 CD151P48509 253 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 CMPK2Q5EBM0 449 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 TCTE1Q5JU00 501 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
TRIM56-204ENST00000487252 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
TRIM56-204ENST00000487252 DAAM2Q86T65 1068 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 VWA5B2Q8N398 1253 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 METTL27Q8N6F8 245 aaPredicted RBP11.03□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF653Q96CK0 615 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 CSPG4P5Q96PW8 444 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 VIPAS39Q9H9C1 493 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 UGT1A7Q9HAW7 530 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 UGT1A10Q9HAW8 530 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 UGT1A8Q9HAW9 530 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 SMOXQ9NWM0 555 aa11.03□□□□□ -0.64
TRIM56-204ENST00000487252 A8MUI8 341 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 CDK2AP1O14519 115 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 MAN1A2O60476 641 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 SUN1O94901 812 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 SLC4A1P02730 911 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 TPBGLP0DKB5 382 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 GLI4P10075 376 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 EPXP11678 715 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 PEBP1P30086 187 aaKnown RBP11.02□□□□□ -0.65
TRIM56-204ENST00000487252 SHMT2P34897 504 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 SERPINB6P35237 376 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 PAFAH1B1P43034 410 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 EFNA3P52797 238 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 HADHBP55084 474 aaKnown RBP11.02□□□□□ -0.65
TRIM56-204ENST00000487252 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 GALNT2Q10471 571 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 FASTKQ14296 549 aaKnown RBP11.02□□□□□ -0.65
TRIM56-204ENST00000487252 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 FAM214AQ32MH5 1076 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 FCRLBQ6BAA4 426 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 PLAG1Q6DJT9 500 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 PRMT9Q6P2P2 845 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 ARHGAP11AQ6P4F7 1023 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms