RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ERVK-10P10266 1014 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 MPP1Q00013 466 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 KLC1Q07866 573 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 HIF1AQ16665 826 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 HKDC1Q2TB90 917 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 PRTGQ2VWP7 1150 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 CYHR1Q6ZMK1 362 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 CUZD1Q86UP6 607 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 PAQR7Q86WK9 346 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 IQCKQ8N0W5 287 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 ZADH2Q8N4Q0 377 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 STT3BQ8TCJ2 826 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 ZNF480Q8WV37 535 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 CABS1Q96KC9 395 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 SIGLEC10Q96LC7 697 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 GPR21Q99679 349 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 ILKAPQ9H0C8 392 aaPredicted RBP17.7■□□□□ 0.42
CLK1-211ENST00000481641 FAM114A2Q9NRY5 505 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 VPS9D1Q9Y2B5 631 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 HIVEP3Q5T1R4 2406 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 PGRMC1O00264 195 aaKnown RBP17.69■□□□□ 0.42
CLK1-211ENST00000481641 NRDCO43847 1150 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 HAUS5O94927 633 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 ZGLP1P0C6A0 271 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 MAGEA3P43357 314 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 GLRBP48167 497 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 Q0VFX4 171 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 NR6A1Q15406 480 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 LONRF1Q17RB8 773 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 TUBB8Q3ZCM7 444 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 VWA2Q5GFL6 755 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 ARMC3Q5W041 872 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 ICE2Q659A1 982 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 LAPTM4BQ86VI4 370 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 NAT8LQ8N9F0 302 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 OR11G2Q8NGC1 345 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 PRR7Q8TB68 274 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 NACC2Q96BF6 587 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 MIEF2Q96C03 454 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 C8orf44Q96CB5 159 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 CRB3Q9BUF7 120 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 CCDC68Q9H2F9 335 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 SEMA3GQ9NS98 782 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 NXT1Q9UKK6 140 aaKnown RBP17.69■□□□□ 0.42
CLK1-211ENST00000481641 RUVBL1Q9Y265 456 aaKnown RBP17.69■□□□□ 0.42
CLK1-211ENST00000481641 NTNG1Q9Y2I2 539 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 DHRS7Q9Y394 339 aa17.69■□□□□ 0.42
CLK1-211ENST00000481641 E7ENX8 843 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 KLHL41O60662 606 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 BANF1O75531 89 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 IPO13O94829 963 aaKnown RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 STATHP02808 62 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 MPC1LP0DKB6 136 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 FBLP22087 321 aaKnown RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 SNRPNP63162 240 aaKnown RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 TAP2Q03519 686 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 OCA2Q04671 838 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 PRDX1Q06830 199 aaKnown RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 ARHGAP19Q14CB8 494 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 MUM1Q2TAK8 710 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 TTLL9Q3SXZ7 439 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 CRB2Q5IJ48 1285 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 ZNF425Q6IV72 752 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 PRMT9Q6P2P2 845 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 Q6ZS92 163 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 NEK10Q6ZWH5 1172 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 PIWIL4Q7Z3Z4 852 aaKnown RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 PLD3Q8IV08 490 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 CPNE9Q8IYJ1 553 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 CSNK1A1LQ8N752 337 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 CD200R1Q8TD46 325 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 ASB11Q8WXH4 323 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 OSBPL9Q96SU4 736 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 YIPF2Q9BWQ6 316 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 SLC29A3Q9BZD2 475 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 IARS2Q9NSE4 1012 aaKnown RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 CUEDC1Q9NWM3 386 aaPredicted RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 ZNF282Q9UDV7 671 aaPredicted RBP17.68■□□□□ 0.42
CLK1-211ENST00000481641 C3orf18Q9UK00 162 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 FBXO5Q9UKT4 447 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 NBPF19A0A087WUL8 3843 aa17.68■□□□□ 0.42
CLK1-211ENST00000481641 SMAPO00193 183 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 HAT1O14929 419 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 P2RX6O15547 441 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 PHF2O75151 1096 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 VPS26AO75436 327 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 NAA25Q14CX7 972 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 HSP90AA5PQ58FG0 334 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 ADCK2Q7Z695 626 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 LRRC56Q8IYG6 542 aaPredicted RBP17.67■□□□□ 0.42
CLK1-211ENST00000481641 AMER2Q8N7J2 671 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 SSC4DQ8WTU2 575 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 TM9SF4Q92544 642 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 KCNJ9Q92806 393 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 THOC3Q96J01 351 aaKnown RBP17.67■□□□□ 0.42
CLK1-211ENST00000481641 OR2A5Q96R48 311 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 NAP1L3Q99457 506 aaPredicted RBP17.67■□□□□ 0.42
CLK1-211ENST00000481641 ZNF160Q9HCG1 818 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 PCYOX1Q9UHG3 505 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms