RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PDPRQ8NCN5 879 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 OR2W6PQ8NHA6 318 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 EPS8L3Q8TE67 593 aaKnown RBP25.73■■□□□ 1.71
CCM2-211ENST00000478582 PMEPA1Q969W9 287 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 MED8Q96G25 268 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 CPNE5Q9HCH3 593 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 SLC6A20Q9NP91 592 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 FOXJ2Q9P0K8 574 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 RARRES3Q9UL19 164 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 IGKV1-8A0A0C4DH67 115 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 OR2A25A4D2G3 310 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 CCDC151A5D8V7 595 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 ERLIN1O75477 346 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 LIPCP11150 499 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 NPPBP16860 134 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 HRH2P25021 359 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 GPR19Q15760 415 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 PTCHD3Q3KNS1 767 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.72■■□□□ 1.71
CCM2-211ENST00000478582 RIBC1Q8N443 379 aaPredicted RBP25.72■■□□□ 1.71
CCM2-211ENST00000478582 CTRCQ99895 268 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 HAUS8Q9BT25 410 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 DPH7Q9BTV6 452 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 TMEM109Q9BVC6 243 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 SPRY4Q9C004 299 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 NUDT4Q9NZJ9 180 aa25.72■■□□□ 1.71
CCM2-211ENST00000478582 PTBP2Q9UKA9 531 aaKnown RBP25.72■■□□□ 1.71
CCM2-211ENST00000478582 TEX51A0A1B0GUA7 166 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 SYCE1LA8MT33 242 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 RBP1P09455 135 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 SLC6A12P48065 614 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 GLRBP48167 497 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 RELAQ04206 551 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 VAC14Q08AM6 782 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 IFFO1Q0D2I5 559 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 SOWAHCQ53LP3 525 aaPredicted RBP25.71■■□□□ 1.71
CCM2-211ENST00000478582 ZNF425Q6IV72 752 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 ZFAND4Q86XD8 727 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 PPP1R3BQ86XI6 285 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 CYP4X1Q8N118 509 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 PYCR2Q96C36 320 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 PLCD4Q9BRC7 762 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 FANCEQ9HB96 536 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 ABCF3Q9NUQ8 709 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 ZNF358Q9NW07 568 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 CD274Q9NZQ7 290 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 SNX7Q9UNH6 387 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 PLAAQ9Y263 795 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 AHCTF1Q8WYP5 2266 aa25.71■■□□□ 1.71
CCM2-211ENST00000478582 CACNA1GO43497 2377 aa25.7■■□□□ 1.71
CCM2-211ENST00000478582 NCF1BA6NI72 391 aaPredicted RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 NCF1CA8MVU1 366 aaPredicted RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 TAPBPO15533 448 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 CTIFO43310 598 aaKnown RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 IPO13O94829 963 aaKnown RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 MT-ND3P03897 115 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 MTHFD2P13995 350 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 NCF1P14598 390 aaPredicted RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 TGIF1Q15583 401 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 TECRLQ5HYJ1 363 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 ZC3H12BQ5HYM0 836 aaKnown RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 ARHGAP40Q5TG30 622 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 SNRNP27Q8WVK2 155 aaKnown RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 ALKBH8Q96BT7 664 aaKnown RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 TSNARE1Q96NA8 513 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 OR4K3Q96R72 315 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 UBL7Q96S82 380 aaPredicted RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 CCNL2Q96S94 520 aaPredicted RBP25.7■■□□□ 1.7
CCM2-211ENST00000478582 TMEM184CQ9NVA4 438 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 PLCL2Q9UPR0 1127 aa25.7■■□□□ 1.7
CCM2-211ENST00000478582 SMIM23A6NLE4 172 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.69■■□□□ 1.7
CCM2-211ENST00000478582 MAP2K7O14733 419 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 S100BP04271 92 aaPredicted RBP25.69■■□□□ 1.7
CCM2-211ENST00000478582 CCDC81Q6ZN84 652 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 SH2D5Q6ZV89 423 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 THOC6Q86W42 341 aaKnown RBP25.69■■□□□ 1.7
CCM2-211ENST00000478582 PAQR7Q86WK9 346 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 C17orf64Q86WR6 236 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 DTX1Q86Y01 620 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 TMEM79Q9BSE2 394 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 CNOT10Q9H9A5 744 aaKnown RBP25.69■■□□□ 1.7
CCM2-211ENST00000478582 ENAMQ9NRM1 1142 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 PCMTD2Q9NV79 361 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 LGALS13Q9UHV8 139 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 SERTAD3Q9UJW9 196 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 PILRAQ9UKJ1 303 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 TMEM184BQ9Y519 407 aaPredicted RBP25.69■■□□□ 1.7
CCM2-211ENST00000478582 PCM1Q15154 2024 aa25.69■■□□□ 1.7
CCM2-211ENST00000478582 A0A1W2PPM1 405 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 TLDC2A0PJX2 215 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 SUPT3HB4E1H0 165 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 TMEM150CB9EJG8 249 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 H3BMH7 237 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 K7ENP7 123 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 HCRTR1O43613 425 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 KLK8O60259 260 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 CTSVO60911 334 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 SUPT3HO75486 399 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 SNRNP200O75643 2136 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms