RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 FAM83DQ9H4H8 585 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 RNF121Q9H920 327 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 GLOD4Q9HC38 313 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SDHAF3Q9NRP4 125 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 PLCXD1Q9NUJ7 323 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SLC23A1Q9UHI7 598 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 PFDN2Q9UHV9 154 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TINAGQ9UJW2 476 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 HSPB11Q9Y547 144 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 CA12O43570 354 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TRIM3O75382 744 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SERPINA1P01009 418 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 RPS17P08708 135 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 MAPKAPK2P49137 400 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 GEMP55040 296 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ADIGQ0VDE8 80 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 PLD1Q13393 1074 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 KCTD2Q14681 263 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 KIAA0040Q15053 153 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 DCAF15Q66K64 600 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 C19orf48Q6RUI8 117 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 PGBD5Q8N414 524 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ARL6IP6Q8N6S5 226 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ZNF565Q8N9K5 539 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 OR6P1Q8NGX9 317 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 NUDT8Q8WV74 236 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 PCNPQ8WW12 178 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 POP5Q969H6 163 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 MYDGFQ969H8 173 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SLC2A13Q96QE2 648 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ZNF70Q9UC06 446 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TLR6Q9Y2C9 796 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SLC35F4A4IF30 521 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 BTN3A3O00478 584 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 E2F3O00716 465 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 CD3EAPO15446 510 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 GMDSO60547 372 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 FCER2P06734 321 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 GMPSP49915 693 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 RPP38P78345 283 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 PLIN5Q00G26 463 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 YWHAHQ04917 246 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SCN1BQ07699 218 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ANKS6Q68DC2 871 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 Q6ZSR9 355 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 LDB1Q86U70 411 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ZDHHC21Q8IVQ6 265 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TRIM48Q8IWZ4 208 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 MSRB3Q8IXL7 192 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ZNF557Q8N988 423 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 UBASH3BQ8TF42 649 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SLC9A6Q92581 669 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 ATG4CQ96DT6 458 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 CELF6Q96J87 481 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TBCDQ9BTW9 1192 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 OR51B5Q9H339 312 aa10.28□□□□□ -0.76
ABCF1-205ENST00000475993 TFB2MQ9H5Q4 396 aaKnown RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 RANBP3Q9H6Z4 567 aaPredicted RBP10.28□□□□□ -0.76
ABCF1-205ENST00000475993 SBF1O95248 1867 aa10.27□□□□□ -0.76
ABCF1-205ENST00000475993 ANKRD31Q8N7Z5 1873 aa10.27□□□□□ -0.76
ABCF1-205ENST00000475993 KPNA5O15131 536 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 SEC14L5O43304 696 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 TNFRSF21O75509 655 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 G6PDP11413 515 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 CHRNA5P30532 468 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 LTB4RQ15722 352 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 SLC35F1Q5T1Q4 408 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 TIGD7Q6NT04 549 aaPredicted RBP10.27□□□□□ -0.77
ABCF1-205ENST00000475993 RETSATQ6NUM9 610 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 RNF130Q86XS8 419 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 DNAJC22Q8N4W6 341 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 C2orf69Q8N8R5 385 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 WDR48Q8TAF3 677 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 NETO1Q8TDF5 533 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 GGHQ92820 318 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 LPPQ93052 612 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 COQ8BQ96D53 544 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 MRGPRX2Q96LB1 330 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 WDFY2Q96P53 400 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 MYOCQ99972 504 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF416Q9BWM5 594 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 FSD1LQ9BXM9 530 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 TMEM39BQ9GZU3 492 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 TMEM168Q9H0V1 697 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 ATXN3LQ9H3M9 355 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 PCDHB16Q9NRJ7 776 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 RGS18Q9NS28 235 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 SLC25A37Q9NYZ2 338 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 STOML2Q9UJZ1 356 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 ACAD8Q9UKU7 415 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 PRELID3BQ9Y3B1 194 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 CLCA1A8K7I4 914 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 NT5C1B-RDH14C9J2C7 533 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
ABCF1-205ENST00000475993 ERN1O75460 977 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms