RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 MBOAT1Q6ZNC8 495 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 PAQR7Q86WK9 346 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 OR2Y1Q8NGV0 311 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 LINGO1Q96FE5 620 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 EPN3Q9H201 632 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 DPH5Q9H2P9 285 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 CUEDC1Q9NWM3 386 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-203ENST00000474056 ANAPC2Q9UJX6 822 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 PDE10AQ9Y233 779 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 CCNDBP1O95273 360 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 ZIC2O95409 532 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-203ENST00000474056 TSPAN12O95859 305 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 EIF2S1P05198 315 aaKnown RBP17.14■□□□□ 0.33
UPF3A-203ENST00000474056 UMODP07911 640 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 FDXRP22570 491 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 ETF1P62495 437 aaKnown RBP17.14■□□□□ 0.33
UPF3A-203ENST00000474056 TLE1Q04724 770 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 FRG1Q14331 258 aaKnown RBP17.14■□□□□ 0.33
UPF3A-203ENST00000474056 ZNF425Q6IV72 752 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 MRGPREQ86SM8 312 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 ZBED8Q8IZ13 594 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 MYO1HQ8N1T3 1032 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 OLFM1Q99784 485 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 SLC25A23Q9BV35 468 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 ZFATQ9P243 1243 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 STOX2Q9P2F5 926 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-203ENST00000474056 CORO1CQ9ULV4 474 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-203ENST00000474056 PSAT1Q9Y617 370 aa17.14■□□□□ 0.33
UPF3A-203ENST00000474056 HYKKA2RU49 373 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 H0YGG7 62 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 ONECUT2O95948 504 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 C8GP07360 202 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 CD63P08962 238 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 OR1D4P47884 311 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 ARF3P61204 181 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-203ENST00000474056 TBPL1P62380 186 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 MGAT5Q09328 741 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 KLRB1Q12918 225 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 SP140Q13342 867 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 PDAP1Q13442 181 aaKnown RBP17.13■□□□□ 0.33
UPF3A-203ENST00000474056 FAM214AQ32MH5 1076 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 THEMIS2Q5TEJ8 643 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 FAM45BPQ6NSW5 357 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 OVCH1Q7RTY7 1134 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 TMEM102Q8N9M5 508 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-203ENST00000474056 FAM45AQ8TCE6 357 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 FKBP10Q96AY3 582 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 C10orf90Q96M02 699 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 ERP44Q9BS26 406 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 VWA7Q9Y334 891 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 PCDHGA9Q9Y5G4 932 aaKnown RBP17.13■□□□□ 0.33
UPF3A-203ENST00000474056 MAU2Q9Y6X3 613 aa17.13■□□□□ 0.33
UPF3A-203ENST00000474056 NDC80O14777 642 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 HAT1O14929 419 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 CEACAM4O75871 244 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 CASRP41180 1078 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 ABATP80404 500 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 NKG7Q16617 165 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 PHKG1Q16816 387 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 PRTGQ2VWP7 1150 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 CAPN12Q6ZSI9 719 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 MED25Q71SY5 747 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 ADCK2Q7Z695 626 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 PLD3Q8IV08 490 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 PALM2Q8IXS6 379 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 BBOF1Q8ND07 529 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 FDCSPQ8NFU4 85 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 PTERQ96BW5 349 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 CCDC138Q96M89 665 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 OR2A5Q96R48 311 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 SPSB2Q99619 263 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 PARVBQ9HBI1 364 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 MLXIPLQ9NP71 852 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 CCDC177Q9NQR7 707 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-203ENST00000474056 MOCS1Q9NZB8 636 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 CTSFQ9UBX1 484 aa17.12■□□□□ 0.33
UPF3A-203ENST00000474056 H7BY64 318 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 MASP2O00187 686 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 SLC16A5O15375 505 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 WISP1O95388 367 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 ALBP02768 609 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 PIM1P11309 404 aaPredicted RBP17.11■□□□□ 0.33
UPF3A-203ENST00000474056 EZRP15311 586 aaKnown RBP17.11■□□□□ 0.33
UPF3A-203ENST00000474056 RRADP55042 308 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 IL2P60568 153 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 CALCOCO2Q13137 446 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 CBLBQ13191 982 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 HKDC1Q2TB90 917 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 PRAMEF13Q5VWM6 474 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 DUPD1Q68J44 220 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 TMEM207Q6UWW9 146 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 MAATS1Q7Z4T9 603 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 PPP1R32Q7Z5V6 425 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 ZC3HC1Q86WB0 502 aaKnown RBP17.11■□□□□ 0.33
UPF3A-203ENST00000474056 PRAP1Q96NZ9 151 aa17.11■□□□□ 0.33
UPF3A-203ENST00000474056 IP6K3Q96PC2 410 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms