RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DHRS4Q9BTZ2 278 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 FAM117AQ9C073 453 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 SPRTNQ9H040 489 aaPredicted RBP14.66□□□□□ -0.06
SDC3-203ENST00000471567 LHX9Q9NQ69 397 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 ABCF3Q9NUQ8 709 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 TMEM184CQ9NVA4 438 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 SRPK3Q9UPE1 567 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 A0A096LPK6 155 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 LOC101059948A0A1B0GTJ6 334 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 ZSCAN9O15535 394 aaPredicted RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 ZNF749O43361 778 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 KRT37O76014 449 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 ALDOAP04075 364 aaKnown RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 EZRP15311 586 aaKnown RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 RORAP35398 523 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 MAGEA12P43365 314 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 VAC14Q08AM6 782 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 DLG1Q12959 904 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 FAM83EQ2M2I3 478 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 PRAMEF17Q5VTA0 474 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 YOD1Q5VVQ6 348 aaPredicted RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 RHBDD2Q6NTF9 364 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 WDR93Q6P2C0 686 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 ADGRD1Q6QNK2 874 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 C19orf48Q6RUI8 117 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 ZNF517Q6ZMY9 492 aaPredicted RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 ISCA2Q86U28 154 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 VASH2Q86V25 355 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 KLHDC8AQ8IYD2 350 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 TCAIMQ8N3R3 496 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 SLC38A9Q8NBW4 561 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 SNRNP27Q8WVK2 155 aaKnown RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 ALKBH8Q96BT7 664 aaKnown RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 PTERQ96BW5 349 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 RHBDF1Q96CC6 855 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 CLIP3Q96DZ5 547 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 DPH2Q9BQC3 489 aaPredicted RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 SELENOSQ9BQE4 189 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 UNKQ9C0B0 810 aaKnown RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 SLC7A5P2Q9GIP4 190 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 EPB41L4BQ9H329 900 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 GPN2Q9H9Y4 310 aaPredicted RBP14.65□□□□□ -0.06
SDC3-203ENST00000471567 IGSF5Q9NSI5 407 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 WDR70Q9NW82 654 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 SPTBP11277 2137 aa14.65□□□□□ -0.06
SDC3-203ENST00000471567 PTPRQQ9UMZ3 2332 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 A0A0J9YVX5 310 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 FITM1A5D6W6 292 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 H7BY64 318 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 K7ENP7 123 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 MEN1O00255 615 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 EFSO43281 561 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 SNRPAP09012 282 aaKnown RBP14.64□□□□□ -0.07
SDC3-203ENST00000471567 LIFP15018 202 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 TFEBP19484 476 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 GGT5P36269 586 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 GCGRP47871 477 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 ARSFP54793 590 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 VSNL1P62760 191 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 GPS2Q13227 327 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 GRM7Q14831 915 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 OR4D1Q15615 310 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 COL28A1Q2UY09 1125 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 PTCHD3Q3KNS1 767 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 SULT1C3Q6IMI6 304 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 INO80CQ6PI98 192 aaPredicted RBP14.64□□□□□ -0.07
SDC3-203ENST00000471567 DSELQ8IZU8 1212 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 CENPLQ8N0S6 344 aaPredicted RBP14.64□□□□□ -0.07
SDC3-203ENST00000471567 ZSCAN1Q8NBB4 408 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 RHEBL1Q8TAI7 183 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 PROKR1Q8TCW9 393 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 KCTD4Q8WVF5 259 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 PYCR2Q96C36 320 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 NXNL1Q96CM4 212 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 MTBPQ96DY7 904 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 PRAP1Q96NZ9 151 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 NDC1Q9BTX1 674 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 PRORYQ9H606 182 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 PCMTD2Q9NV79 361 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 CUEDC1Q9NWM3 386 aaPredicted RBP14.64□□□□□ -0.07
SDC3-203ENST00000471567 IRAK4Q9NWZ3 460 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 KCND3Q9UK17 655 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 RNF112Q9ULX5 631 aa14.64□□□□□ -0.07
SDC3-203ENST00000471567 KMT2BQ9UMN6 2715 aaPredicted RBP14.64□□□□□ -0.07
SDC3-203ENST00000471567 CACNA1BQ00975 2339 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 HEATR5BQ9P2D3 2071 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 C21orf140B9A014 251 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 TRIM49D1C9J1S8 452 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 TERTO14746 1132 aaKnown RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 NRP2O60462 931 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 KERAO60938 352 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 IPO13O94829 963 aaKnown RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 KLHL2O95198 593 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 CTSBP07858 339 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 COL6A2P12110 1019 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 GCAP28676 217 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 EMP3P54852 163 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 VSX2P58304 361 aaPredicted RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 CXADRP78310 365 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 CSNK1G2P78368 415 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms