RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TMEM81Q6P7N7 255 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 HSDL2Q6YN16 418 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 TMPRSS11AQ6ZMR5 421 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ARHGAP36Q6ZRI8 547 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 C1orf122Q6ZSJ8 110 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 BNIPLQ7Z465 357 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 HSD17B13Q7Z5P4 300 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 NRARPQ7Z6K4 114 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CLEC14AQ86T13 490 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LHFPL3Q86UP9 236 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SIAH1Q8IUQ4 282 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SPATA2LQ8IUW3 424 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 HID1Q8IV36 788 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SLC22A9Q8IVM8 553 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PHC2Q8IXK0 858 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CCDC36Q8IYA8 594 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 DCP1BQ8IZD4 617 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OFCC1Q8IZS5 231 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR8H3Q8N146 312 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR8H2Q8N162 312 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 KRT78Q8N1N4 520 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CBARPQ8N350 705 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 STPG2Q8N412 459 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LRRC71Q8N4P6 559 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LRRC17Q8N6Y2 441 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 YIPF7Q8N8F6 280 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 C12orf29Q8N999 325 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MARCH10Q8NA82 808 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GLIS1Q8NBF1 620 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SRFBP1Q8NEF9 429 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR6S1Q8NH40 331 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR52N1Q8NH53 320 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR5K1Q8NHB7 308 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CLHC1Q8NHS4 586 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ELP5Q8TE02 316 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SDR42E1Q8WUS8 393 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CHTF18Q8WVB6 975 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 AP3S1Q92572 193 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MARC2Q969Z3 335 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GAL3ST3Q96A11 431 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PAWRQ96IZ0 340 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 KIRREL1Q96J84 757 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 KREMEN1Q96MU8 473 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 FOPNLQ96NB1 174 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ERMAPQ96PL5 475 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SORCS2Q96PQ0 1159 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR2A14Q96R47 310 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GAD1Q99259 594 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 TBCBQ99426 244 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RAD9AQ99638 391 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 NPAS2Q99743 824 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MRPL57Q9BQC6 102 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 EIF2AK1Q9BQI3 630 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF577Q9BSK1 485 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 TTPALQ9BTX7 342 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GATA5Q9BWX5 397 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 WDR11Q9BZH6 1224 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF436Q9C0F3 470 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CCDC90BQ9GZT6 254 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 QRSL1Q9H0R6 528 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 DNTTIP1Q9H147 329 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PCDHAC1Q9H158 963 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SDCBP2Q9H190 292 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 FAM124BQ9H5Z6 455 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RANGRFQ9HD47 186 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ACOT13Q9NPJ3 140 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CRTAC1Q9NQ79 661 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SLC35C2Q9NQQ7 365 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ENTPD7Q9NQZ7 604 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 POLE4Q9NR33 117 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RASSF1Q9NS23 344 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF275Q9NSD4 429 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 TRMT13Q9NUP7 481 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MPP6Q9NZW5 540 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SRP68Q9UHB9 627 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 NARFQ9UHQ1 456 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ENOPH1Q9UHY7 261 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PACSIN3Q9UKS6 424 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ABCG2Q9UNQ0 655 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CYP8B1Q9UNU6 501 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RUVBL2Q9Y230 463 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 HSPB11Q9Y547 144 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GMPPBQ9Y5P6 360 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MAGED1Q9Y5V3 778 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ACTL7AQ9Y615 435 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 AP1M2Q9Y6Q5 423 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 UBR2Q8IWV8 1755 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 COL16A1Q07092 1604 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DDX60LQ5H9U9 1706 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 A0A087X1B8 175 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 C17orf113A0A1B0GUU1 675 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 IQCMA0A1B0GVH7 501 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TCRBV5S2A0A599 114 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 C3orf70A6NLC5 250 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 A8MX80 341 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 KCNU1A8MYU2 1149 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 MCIDASD6RGH6 385 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms