RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PYCR2Q96C36 320 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 ZNF689Q96CS4 500 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CMTM7Q96FZ5 175 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 APOLD1Q96LR9 279 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 C2orf49Q9BVC5 232 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 GABARAPL1Q9H0R8 117 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 GMPPBQ9Y5P6 360 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 hCG_2039718K7EN88 272 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 M0R3G1 203 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 KPNA4O00629 521 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 MAPK1P28482 360 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CD6P30203 668 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 EIF2B2P49770 351 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 VEPH1Q14D04 833 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 TPGS2Q68CL5 300 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 LAIR1Q6GTX8 287 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CBARPQ8N350 705 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 GLMNQ92990 594 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CLIP3Q96DZ5 547 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 ZNF334Q9HCZ1 680 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 TM9SF3Q9HD45 589 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 IL1RAPQ9NPH3 570 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 SCN3BQ9NY72 215 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 DAPK2Q9UIK4 370 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 KCNE1BA0A087WTH5 132 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ALDH4A1P30038 563 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ZXDBP98169 803 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 BCL2A1Q16548 175 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ADPRMQ3LIE5 342 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 SMUG1Q53HV7 270 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 LRRC70Q7Z2Q7 622 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 NDNFQ8TB73 568 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 C19orf43Q9BQ61 176 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 DUSP21Q9H596 190 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ATP13A3Q9H7F0 1226 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ZDHHC3Q9NYG2 299 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 PIKFYVEQ9Y2I7 2098 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 NPIPB15A6NHN6 443 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 SLC22A1O15245 554 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 URODP06132 367 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 JUNDP17535 347 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 KIR3DL1P43629 444 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 SLC35A2P78381 396 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 HSPA14Q0VDF9 509 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 KEAP1Q14145 624 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 KDM4DQ6B0I6 523 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 CAPN13Q6MZZ7 669 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 SERPINA11Q86U17 422 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ELMOD1Q8N336 334 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ZFP90Q8TF47 636 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 NELL1Q92832 810 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 TBC1D20Q96BZ9 403 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ZNF641Q96N77 438 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 ALPK1Q96QP1 1244 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 WDR12Q9GZL7 423 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 AKIP1Q9NQ31 210 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 PDP1Q9P0J1 537 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 CPQQ9Y646 472 aa15.32■□□□□ 0.04
TSPAN4-211ENST00000468468 CLIC1O00299 241 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 FPGTO14772 594 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 SOCS5O75159 536 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 HIST1H2AGP0C0S8 130 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 CSF2RAP15509 400 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 AMD1P17707 334 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 ENGP17813 658 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 HIST1H2ADP20671 130 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 DNAJA1P31689 397 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 RAB33AQ14088 237 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 GBX1Q14549 363 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 PTCHD3Q3KNS1 767 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 GGTA1PQ4G0N0 100 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 CDKL4Q5MAI5 379 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 PERM1Q5SV97 790 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 TXNDC8Q6A555 127 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 NEK5Q6P3R8 708 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 TTC23LQ6PF05 361 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 CRTC1Q6UUV9 634 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 HORMAD1Q86X24 394 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 RAVER1Q8IY67 606 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 RNF175Q8N4F7 328 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 ARL14EPQ8N8R7 260 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 TTC29Q8NA56 475 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 ASIC4Q96FT7 647 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 TRMT2BQ96GJ1 504 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 HIST1H2AHQ96KK5 128 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 PANX1Q96RD7 426 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 COPS8Q99627 209 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 HIST1H2AJQ99878 128 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 MYOCQ99972 504 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 H2AFJQ9BTM1 129 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 EBPLQ9BY08 206 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 RC3H2Q9HBD1 1191 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 NADKO95544 446 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 FABP3P05413 133 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 PSMB9P28065 219 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 VBP1P61758 197 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 B4GALNT1Q00973 533 aa15.31■□□□□ 0.04
TSPAN4-211ENST00000468468 DGCR6Q14129 220 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms