RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 OTOAQ7RTW8 1153 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 LAPTM4BQ86VI4 370 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 PRSS58Q8IYP2 241 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ARHGEF39Q8N4T4 335 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 TAB3Q8N5C8 712 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 UBL4BQ8N7F7 174 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 AMER3Q8N944 861 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 GSDMBQ8TAX9 411 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 MAGEC3Q8TD91 643 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 PANX2Q96RD6 677 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ZNF700Q9H0M5 742 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 TSPY26PQ9H489 355 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ETNK1Q9HBU6 452 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 MKKSQ9NPJ1 570 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 CATSPERZQ9NTU4 200 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 PLA2G3Q9NZ20 509 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ANAPC5Q9UJX4 755 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 TTC7AQ9ULT0 858 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 NFS1Q9Y697 457 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 CPAMD8Q8IZJ3 1885 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 TCRBV7S2A1N4TA0A589 114 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 KRT87PA6NCN2 255 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 H0YGG7 62 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 VPS26AO75436 327 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 UNC5CO95185 931 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 RASAL1O95294 804 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 MATN4O95460 622 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 WDPCPO95876 746 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 EIF2S1P05198 315 aaKnown RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 CYC1P08574 325 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 ICAM2P13598 275 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 AGAP20933 346 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 MST1P26927 711 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 CMPK1P30085 196 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 BDKRB1P46663 353 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 ARF3P61204 181 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 RELAQ04206 551 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 PCOLCEQ15113 449 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 PTRHD1Q6GMV3 140 aaKnown RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 HIBCHQ6NVY1 386 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 FBXO42Q6P3S6 717 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 TMEM205Q6UW68 189 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 TMEM207Q6UWW9 146 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 PEX26Q7Z412 305 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 MRGPRGQ86SM5 289 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 LDB1Q86U70 411 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 SIRT6Q8N6T7 355 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 RNF214Q8ND24 703 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 PPHLN1Q8NEY8 458 aaKnown RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 CABS1Q96KC9 395 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 LURAP1Q96LR2 239 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 FOPNLQ96NB1 174 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 PLCD4Q9BRC7 762 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 DPH7Q9BTV6 452 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 FRMD8P1Q9BZ68 369 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 IGSF5Q9NSI5 407 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 TREX1Q9NSU2 369 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 TRPC4Q9UBN4 977 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 RUVBL2Q9Y230 463 aaKnown RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 RUVBL1Q9Y265 456 aaKnown RBP9.91□□□□□ -0.82
HDLBP-227ENST00000458564 PCDHGB6Q9Y5F9 930 aa9.91□□□□□ -0.82
HDLBP-227ENST00000458564 TRGV8A0A0C4DH27 118 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 IGKV1-8A0A0C4DH67 115 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 OR5H15A6NDH6 313 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 E7EVH7 732 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 MYO1CO00159 1063 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 CD3EAPO15446 510 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 LIASO43766 372 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 PRAMEF2O60811 474 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 WFS1O76024 890 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 CELA2AP08217 269 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 MYBL2P10244 700 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 ITGAMP11215 1152 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 EZRP15311 586 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 HTR1EP28566 365 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 ADARP55265 1226 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 YBX1P67809 324 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 EEF1A2Q05639 463 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 RBPJQ06330 500 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 FASTKQ14296 549 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 ARHGAP19Q14CB8 494 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 ZNF425Q6IV72 752 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 XKRXQ6PP77 449 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 PAQR7Q86WK9 346 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 ZC3H7AQ8IWR0 971 aaKnown RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 SYCE1Q8N0S2 351 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 CSNK1A1LQ8N752 337 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 SKA2Q8WVK7 121 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 SMPDL3AQ92484 453 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 HES6Q96HZ4 224 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 IMMP1LQ96LU5 166 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 BIRC8Q96P09 236 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 OR2A5Q96R48 311 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 TUBB6Q9BUF5 446 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 TRIM8Q9BZR9 551 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 DRC3Q9H069 523 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms