RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CTSVO60911 334 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 IPO13O94829 963 aaKnown RBP23.5■■□□□ 1.35
VEGFA-209ENST00000425836 WDR47O94967 919 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 SBK3P0C264 359 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 C1QTNF9P0C862 333 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 SLC5A2P31639 672 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 SLC18A2Q05940 514 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 DEFB110Q30KQ9 67 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 C16orf46Q6P387 395 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 LRIG3Q6UXM1 1119 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 CEACAM20Q6UY09 585 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 C4orf33Q8N1A6 199 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 PRAP1Q96NZ9 151 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 ASPSCR1Q9BZE9 553 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 CD244Q9BZW8 370 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 CPSF2Q9P2I0 782 aaKnown RBP23.5■■□□□ 1.35
VEGFA-209ENST00000425836 RARRES3Q9UL19 164 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 ASB1Q9Y576 335 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 TMEM150CB9EJG8 249 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 TK2O00142 265 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 STK16O75716 305 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 GFAPP14136 432 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 AGTR2P50052 363 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 ERVPABLB-1P60509 514 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 PFKFB4Q16877 469 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 CEP85LQ5SZL2 805 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 FBXO42Q6P3S6 717 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 CYB5D1Q6P9G0 228 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 BPHLQ86WA6 291 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-209ENST00000425836 PPP1R3BQ86XI6 285 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 MCATQ8IVS2 390 aaKnown RBP23.49■■□□□ 1.35
VEGFA-209ENST00000425836 ZBTB9Q96C00 473 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 ZNF578Q96N58 590 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-209ENST00000425836 THSD1Q9NS62 852 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 TMEM184CQ9NVA4 438 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 DKK4Q9UBT3 224 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 PLCL2Q9UPR0 1127 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 WDFY3Q8IZQ1 3526 aa23.49■■□□□ 1.35
VEGFA-209ENST00000425836 CAPNS1P04632 268 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 CDH1P12830 882 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 H2AFXP16104 143 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-209ENST00000425836 HRH2P25021 359 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 TBC1D25Q3MII6 688 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 UNQ6494/PRO21346Q6UXR6 183 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 ADCK2Q7Z695 626 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 OR1L3Q8NH93 324 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 UBTD2Q8WUN7 234 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 NEIL2Q969S2 332 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 FCRL4Q96PJ5 515 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 TEFMQ96QE5 360 aaKnown RBP23.48■■□□□ 1.35
VEGFA-209ENST00000425836 ZPBPQ9BS86 351 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 CCDC86Q9H6F5 360 aaKnown RBP23.48■■□□□ 1.35
VEGFA-209ENST00000425836 FANCEQ9HB96 536 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 PILRAQ9UKJ1 303 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 DYRK1BQ9Y463 629 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 KCNE2Q9Y6J6 123 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 GLRA3O75311 464 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 CTSBP07858 339 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 CRHR1P34998 444 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 CCT5P48643 541 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 ALDH18A1P54886 795 aaKnown RBP23.48■■□□□ 1.35
VEGFA-209ENST00000425836 SETDB1Q15047 1291 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.48■■□□□ 1.352e-8■■□□□ 12.5
VEGFA-209ENST00000425836 ZC3H12BQ5HYM0 836 aaKnown RBP23.48■■□□□ 1.35
VEGFA-209ENST00000425836 RNF44Q7L0R7 432 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 ABHD11Q8NFV4 315 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 OR8K5Q8NH50 307 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 SLC5A11Q8WWX8 675 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 DNAJC11Q9NVH1 559 aa23.48■■□□□ 1.35
VEGFA-209ENST00000425836 HAT1O14929 419 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 CCNT2O60583 730 aaKnown RBP23.47■■□□□ 1.35
VEGFA-209ENST00000425836 TIAF1O95411 115 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 CSNK1G2P78368 415 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 CASP8Q14790 479 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 CATSPEREQ5SY80 951 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 PWWP2BQ6NUJ5 590 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 SRRM1Q8IYB3 904 aaKnown RBP23.47■■□□□ 1.35
VEGFA-209ENST00000425836 N4BP2L2Q92802 583 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-209ENST00000425836 ARGLU1Q9NWB6 273 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-209ENST00000425836 SERTAD3Q9UJW9 196 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 EMCNQ9ULC0 261 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 TMCO1Q9UM00 188 aa23.47■■□□□ 1.35
VEGFA-209ENST00000425836 A0A0J9YVX5 310 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 H3BMH7 237 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 COPEO14579 308 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 RGS16O15492 202 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-209ENST00000425836 SMIM24O75264 130 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 RELAQ04206 551 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 CDC16Q13042 620 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 LRRC70Q7Z2Q7 622 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 CROCCP2Q86T23 111 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 PTGR2Q8N8N7 351 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-209ENST00000425836 OR4K1Q8NGD4 311 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 PHF21BQ96EK2 531 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 ZFYVE21Q9BQ24 234 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 SPRTNQ9H040 489 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-209ENST00000425836 GRID1Q9ULK0 1009 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 AKAP13Q12802 2813 aa23.46■■□□□ 1.35
VEGFA-209ENST00000425836 EZRP15311 586 aaKnown RBP23.45■■□□□ 1.34
VEGFA-209ENST00000425836 CCR8P51685 355 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms