RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 CHRAC1Q9NRG0 131 aa16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 C14orf105Q9NVL8 296 aa16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 RIC8BQ9NVN3 520 aa16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 ABI3Q9P2A4 366 aa16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 TRPC4Q9UBN4 977 aa16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 SUCOQ9UBS9 1254 aaKnown RBP16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 RUVBL2Q9Y230 463 aaKnown RBP16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 HEATR5BQ9P2D3 2071 aa16.04■□□□□ 0.16
UPF3AP3-201ENST00000420996 LIASO43766 372 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 PHF2O75151 1096 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 NDUFS3O75489 264 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 FTCDO95954 541 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 IFNB1P01574 187 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 CRYABP02511 175 aaKnown RBP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 GRNP28799 593 aaKnown RBP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 AP2B1P63010 937 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 YBX1P67809 324 aaKnown RBP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 EEF1A2Q05639 463 aaKnown RBP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 PCID2Q5JVF3 399 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 RAD9BQ6WBX8 426 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 YIPF2Q9BWQ6 316 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 FRMD8P1Q9BZ68 369 aaPredicted RBP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 TGIF2Q9GZN2 237 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 MKKSQ9NPJ1 570 aaPredicted RBP16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 RAB6BQ9NRW1 208 aa16.03■□□□□ 0.16
UPF3AP3-201ENST00000420996 LOC102723996A0A087X1L8 192 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 TRGV8A0A0C4DH27 118 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 CCL21O00585 134 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 VPS26AO75436 327 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 UNC5CO95185 931 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 RASAL1O95294 804 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 MATN4O95460 622 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 WDPCPO95876 746 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 HEXBP07686 556 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 APRTP07741 180 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 UQCRHP07919 91 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 MYBL2P10244 700 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ERGP11308 486 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ICAM2P13598 275 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 PTGER4P35408 488 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 SLC26A3P40879 764 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 FASTKQ14296 549 aaKnown RBP16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ZXDCQ2QGD7 858 aaPredicted RBP16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 GARNL3Q5VVW2 1013 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 FAAH2Q6GMR7 532 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 MTFR2Q6P444 385 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 BNC2Q6ZN30 1099 aaPredicted RBP16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 MRGPRGQ86SM5 289 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 KIAA1328Q86T90 577 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ZNF808Q8N4W9 903 aaPredicted RBP16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 AMER3Q8N944 861 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 CCDC120Q96HB5 630 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 HES6Q96HZ4 224 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 PLCD4Q9BRC7 762 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ACAT2Q9BWD1 397 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ZNF700Q9H0M5 742 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 MRPS30Q9NP92 439 aaKnown RBP16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 CHST11Q9NPF2 352 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 TREX1Q9NSU2 369 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 SEC14L3Q9UDX4 400 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 ZNF148Q9UQR1 794 aa16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 RUVBL1Q9Y265 456 aaKnown RBP16.02■□□□□ 0.16
UPF3AP3-201ENST00000420996 FFAR3O14843 346 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 GPR42O15529 346 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 F10P00742 488 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 CELA2AP08217 269 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 ANXA5P08758 320 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 ITGAMP11215 1152 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 ETS1P14921 441 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 MST1P26927 711 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 CA7P43166 264 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 EIF3BP55884 814 aaKnown RBP16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 GBX1Q14549 363 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 PCOLCEQ15113 449 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 ABHD17BQ5VST6 288 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 TMEM205Q6UW68 189 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 RPTNQ6XPR3 784 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 GDF7Q7Z4P5 450 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 PAQR7Q86WK9 346 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 CSNK1A1LQ8N752 337 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 OR9A1PQ8NGU1 263 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 SUN3Q8TAQ9 357 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 SMPDL3AQ92484 453 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 MMABQ96EY8 250 aaPredicted RBP16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 PAK5Q9P286 719 aa16.01■□□□□ 0.15
UPF3AP3-201ENST00000420996 PKMP14618 531 aaKnown RBP16■□□□□ 0.15
UPF3AP3-201ENST00000420996 HTR1EP28566 365 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 ATP5DP30049 168 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 RPA3P35244 121 aaPredicted RBP16■□□□□ 0.15
UPF3AP3-201ENST00000420996 SESN2P58004 480 aaPredicted RBP16■□□□□ 0.15
UPF3AP3-201ENST00000420996 RELAQ04206 551 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZNF630Q2M218 657 aaPredicted RBP16■□□□□ 0.15
UPF3AP3-201ENST00000420996 HKDC1Q2TB90 917 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 ANKRD20A4Q4UJ75 823 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 CTSL3PQ5NE16 218 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 HIBCHQ6NVY1 386 aaPredicted RBP16■□□□□ 0.15
UPF3AP3-201ENST00000420996 LRRC8BQ6P9F7 803 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms