RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PLCD4Q9BRC7 762 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 AARSD1Q9BTE6 412 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ZBTB20Q9HC78 741 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 C20orf96Q9NUD7 363 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 TRMT1Q9NXH9 659 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 SCN3AQ9NY46 2000 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 LUZP4Q9P127 313 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 C5AR2Q9P296 337 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ANKMY1Q9P2S6 941 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 TAC3Q9UHF0 121 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 PCYOX1Q9UHG3 505 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 HS3ST3B1Q9Y662 390 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 MAD1L1Q9Y6D9 718 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 SPTBN1Q01082 2364 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ICE1Q9Y2F5 2266 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 IGLV3-12A0A075B6K2 115 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 HYKKA2RU49 373 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 TTLL8A6PVC2 850 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 H0YGG7 62 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 FANCGO15287 622 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 TP73O15350 636 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 CATP04040 527 aaKnown RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 ENO3P13929 434 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 PGAM1P18669 254 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 IMPA1P29218 277 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 ARF3P61204 181 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 PRDX1Q06830 199 aaKnown RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 FAM214AQ32MH5 1076 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 TTLL9Q3SXZ7 439 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 CRB2Q5IJ48 1285 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 VWA5B1Q5TIE3 1220 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 ICE2Q659A1 982 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 KIRREL2Q6UWL6 708 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 IGFL3Q6UXB1 125 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 SHISA6Q6ZSJ9 500 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 KCNMB4Q86W47 210 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 HPS6Q86YV9 775 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 CPNE9Q8IYJ1 553 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 TTC29Q8NA56 475 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 C2CD4AQ8NCU7 369 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 GALNT11Q8NCW6 608 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 INPP5DQ92835 1189 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 PNPLA2Q96AD5 504 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 NACC2Q96BF6 587 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 FER1L6-AS2Q96M78 137 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 OR2A5Q96R48 311 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 SOX17Q9H6I2 414 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 MRPS30Q9NP92 439 aaKnown RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 FAM114A2Q9NRY5 505 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 IARS2Q9NSE4 1012 aaKnown RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 CUEDC1Q9NWM3 386 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 RUVBL1Q9Y265 456 aaKnown RBP10.53□□□□□ -0.72
SSBP3-206ENST00000420121 COMMD10Q9Y6G5 202 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 MAU2Q9Y6X3 613 aa10.53□□□□□ -0.72
SSBP3-206ENST00000420121 EIF3FO00303 357 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 PEX12O00623 359 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 P2RX6O15547 441 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 ZSCAN12O43309 604 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 FOXS1O43638 330 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 ERVK-10P10266 1014 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 PIM1P11309 404 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 GNLYP22749 145 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 RPA3P35244 121 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 EFNA3P52797 238 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 EMP3P54852 163 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 RELAQ04206 551 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 KLC1Q07866 573 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 Q0VFX4 171 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 PPP1R7Q15435 360 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 INPP5JQ15735 1006 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 ZXDCQ2QGD7 858 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 HKDC1Q2TB90 917 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 PLEKHN1Q494U1 663 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 RBM20Q5T481 1227 aaKnown RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 CREG2Q8IUH2 290 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 CNTN4Q8IWV2 1026 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 SHISA5Q8N114 240 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 AMER3Q8N944 861 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 CLEC1AQ8NC01 280 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 STT3BQ8TCJ2 826 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 CALML6Q8TD86 181 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 PWWP2AQ96N64 755 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 NDNQ99608 321 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 EBNA1BP2Q99848 306 aaKnown RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 FAM167BQ9BTA0 163 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 ZNF304Q9HCX3 659 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 SLC17A6Q9P2U8 582 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 FBXL4Q9UKA2 621 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 NXT1Q9UKK6 140 aaKnown RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 ADAMTS6Q9UKP5 1117 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 SH2B3Q9UQQ2 575 aa10.52□□□□□ -0.73
SSBP3-206ENST00000420121 MRPS2Q9Y399 296 aaKnown RBP10.52□□□□□ -0.73
SSBP3-206ENST00000420121 SCN2AQ99250 2005 aa10.51□□□□□ -0.73
SSBP3-206ENST00000420121 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
SSBP3-206ENST00000420121 SMAPO00193 183 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms