RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CNTRLQ7Z7A1 2325 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 FFAR3O14843 346 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 GPR42O15529 346 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 AGFG2O95081 481 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 SLC16A8O95907 504 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 CATP04040 527 aaKnown RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 ALPPP05187 535 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 RPA3P35244 121 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 KLC1Q07866 573 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 TSTA3Q13630 321 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 THOC5Q13769 683 aaKnown RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 ARHGAP19Q14CB8 494 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 RBBP7Q16576 425 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 HIF1AQ16665 826 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 HKDC1Q2TB90 917 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 EIF2S3LQ2VIR3 472 aaKnown RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 TUBB8Q3ZCM7 444 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 ICE2Q659A1 982 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 CYHR1Q6ZMK1 362 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 Q6ZS92 163 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 PARP9Q8IXQ6 854 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 SLC35F6Q8N357 371 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 ARHGEF39Q8N4T4 335 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 OR11G2Q8NGC1 345 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 CD200R1Q8TD46 325 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 GPR21Q99679 349 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 CUEDC1Q9NWM3 386 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 RUVBL1Q9Y265 456 aaKnown RBP17.19■□□□□ 0.34
CXCL12-204ENST00000395793 VPS9D1Q9Y2B5 631 aa17.19■□□□□ 0.34
CXCL12-204ENST00000395793 MAGEB16A2A368 324 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 E7ENX8 843 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 PGRMC1O00264 195 aaKnown RBP17.18■□□□□ 0.34
CXCL12-204ENST00000395793 P2RX6O15547 441 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 PHF2O75151 1096 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 IPO13O94829 963 aaKnown RBP17.18■□□□□ 0.34
CXCL12-204ENST00000395793 MPC1LP0DKB6 136 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 TIAL1Q01085 375 aaKnown RBP eCLIP17.18■□□□□ 0.34
CXCL12-204ENST00000395793 TAP2Q03519 686 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 NR6A1Q15406 480 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 VWA2Q5GFL6 755 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 PIWIL4Q7Z3Z4 852 aaKnown RBP17.18■□□□□ 0.34
CXCL12-204ENST00000395793 LAPTM4BQ86VI4 370 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 FBXO15Q8NCQ5 510 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-204ENST00000395793 ASB11Q8WXH4 323 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 KCNJ9Q92806 393 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 OR2A5Q96R48 311 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 CRB3Q9BUF7 120 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 FAM114A2Q9NRY5 505 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 SEMA3GQ9NS98 782 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-204ENST00000395793 DHRS7Q9Y394 339 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 PCDHGA10Q9Y5H3 936 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 MAD1L1Q9Y6D9 718 aa17.18■□□□□ 0.34
CXCL12-204ENST00000395793 IGLV3-12A0A075B6K2 115 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 GFYI3L273 518 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 BANF1O75531 89 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 HAUS5O94927 633 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 ZGLP1P0C6A0 271 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 FBLP22087 321 aaKnown RBP17.17■□□□□ 0.34
CXCL12-204ENST00000395793 EFNA3P52797 238 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 PRDX1Q06830 199 aaKnown RBP17.17■□□□□ 0.34
CXCL12-204ENST00000395793 LONRF1Q17RB8 773 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 MUM1Q2TAK8 710 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 TTLL9Q3SXZ7 439 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 RNASEH2BQ5TBB1 312 aaKnown RBP17.17■□□□□ 0.34
CXCL12-204ENST00000395793 PRMT9Q6P2P2 845 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 IGFL2Q6UWQ7 119 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 PLD3Q8IV08 490 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 CPNE9Q8IYJ1 553 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 ZADH2Q8N4Q0 377 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 CSNK1A1LQ8N752 337 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 AMER2Q8N7J2 671 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 AMER3Q8N944 861 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 MIEF2Q96C03 454 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 C8orf44Q96CB5 159 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 CABS1Q96KC9 395 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 OSBPL9Q96SU4 736 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 SLC29A3Q9BZD2 475 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 ILKAPQ9H0C8 392 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-204ENST00000395793 LRRC4CQ9HCJ2 640 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 ABCF3Q9NUQ8 709 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 KLHL42Q9P2K6 505 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 PCYOX1Q9UHG3 505 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
CXCL12-204ENST00000395793 NBPF19A0A087WUL8 3843 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 SMAPO00193 183 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 HAT1O14929 419 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 FOXS1O43638 330 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 KLHL41O60662 606 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 CBX6O95503 412 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 SYF2O95926 243 aaKnown RBP17.16■□□□□ 0.34
CXCL12-204ENST00000395793 ERVK-10P10266 1014 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 IMPA1P29218 277 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 SKIV2L2P42285 1042 aaKnown RBP17.16■□□□□ 0.34
CXCL12-204ENST00000395793 EMP3P54852 163 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 NAA25Q14CX7 972 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 HSP90AA5PQ58FG0 334 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 SHISA5Q8N114 240 aa17.16■□□□□ 0.34
CXCL12-204ENST00000395793 SSC4DQ8WTU2 575 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms