RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 NR2F1P10589 423 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 FDXRP22570 491 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 BUD31P41223 144 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 CSTF1Q05048 431 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 MAB21L1Q13394 359 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 SMN1Q16637 294 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 ANXA8L1Q5VT79 327 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 FAM110BQ8TC76 370 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PPCDCQ96CD2 204 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 TTYH1Q9H313 450 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 GTF2A1LQ9UNN4 478 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 A0A1W2PRG6 482 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 FAM92AA1XBS5 289 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 NFE2L1Q14494 772 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 MS4A13Q5J8X5 152 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 KCTD11Q693B1 232 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 TP53INP1Q96A56 240 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ZFP3Q96NJ6 502 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 KLHL28Q9NXS3 571 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 OAS3Q9Y6K5 1087 aaKnown RBP13.88□□□□□ -0.19
RTF1-201ENST00000389629 LOC730098B7Z3J9 87 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 GSRP00390 522 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 OR1E2P47887 323 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 HTR6P50406 440 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 FAM189BP81408 668 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 UGT8Q16880 541 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 GCNT6Q5T4J0 391 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ZFAND4Q86XD8 727 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 MMP28Q9H239 520 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 DUS2Q9NX74 493 aaKnown RBP13.88□□□□□ -0.19
RTF1-201ENST00000389629 SOX14O95416 240 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 CATP04040 527 aaKnown RBP13.88□□□□□ -0.19
RTF1-201ENST00000389629 MAGEA12P43365 314 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
RTF1-201ENST00000389629 CD300CQ08708 224 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ABHD18Q0P651 414 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 AGAP7PQ5VUJ5 663 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ZDHHC6Q9H6R6 413 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 SGK2Q9HBY8 427 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 USP3Q9Y6I4 520 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ACSL4O60488 711 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 KLHL18O94889 574 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 GGT1P19440 569 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 PRKACBP22694 351 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 CSTF2P33240 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
RTF1-201ENST00000389629 COQ5Q5HYK3 327 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
RTF1-201ENST00000389629 GALNT6Q8NCL4 622 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 TRPV1Q8NER1 839 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 RHOXF1Q8NHV9 184 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 TEX47Q8TBZ9 253 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 ISL2Q96A47 359 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 CRELD1Q96HD1 420 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 NMUR1Q9HB89 426 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 IL1RAPQ9NPH3 570 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 DNAJC11Q9NVH1 559 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 GPR83Q9NYM4 423 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 FZD4Q9ULV1 537 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 FCF1Q9Y324 198 aaKnown RBP13.88□□□□□ -0.19
RTF1-201ENST00000389629 UGT2A1Q9Y4X1 527 aa13.88□□□□□ -0.19
RTF1-201ENST00000389629 EMP3P54852 163 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 DCST1Q5T197 706 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 VTCN1Q7Z7D3 282 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 SEMA3GQ9NS98 782 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 KCTD5Q9NXV2 234 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 DNAJC27Q9NZQ0 273 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 ARHGEF33A8MVX0 844 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 NPRL3Q12980 569 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 C9orf131Q5VYM1 1079 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 PM20D1Q6GTS8 502 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 MEIOBQ8N635 442 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 OR8J3Q8NGG0 315 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 C9orf43Q8TAL5 461 aaPredicted RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 CSGALNACT1Q8TDX6 532 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 ZNF382Q96SR6 550 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 MGLLQ99685 303 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 NEURL2Q9BR09 285 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 RBM38Q9H0Z9 239 aaKnown RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 RHCGQ9UBD6 479 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 MEIS3P2A8K0S8 358 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 UPK3BL1B0FP48 263 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 UPK3BL2E5RIL1 263 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 HNRNPA0Q13151 305 aaKnown RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 PNCKQ6P2M8 343 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 ZNF431Q8TF32 576 aaPredicted RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 PIGKQ92643 395 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 PKP4Q99569 1192 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 RDH8Q9NYR8 311 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 AGAP5A6NIR3 686 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 SLC28A2O43868 658 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 UGT2B17O75795 530 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 FGF4P08620 206 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 WEE1P30291 646 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 ARCN1P48444 511 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms