RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ACRBPQ8NEB7 543 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 SLC35B2Q8TB61 432 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 LKAAEAR1Q8TD35 194 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 TAAR6Q96RI8 345 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 DESI2Q9BSY9 194 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 RNF32Q9H0A6 362 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 TCAF1Q9Y4C2 921 aa15.23■□□□□ 0.03
VCX3A-201ENST00000381089 LOC105369274A0A096LPK9 316 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 IGHV1-45A0A0A0MS14 117 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 LOC102723532A0A0G2JNH3 316 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 A0A1W2PQ72 361 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 SUN1O94901 812 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 HTR1EP28566 365 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 BDKRB1P46663 353 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 ABHD17BQ5VST6 288 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 LRRC8AQ8IWT6 810 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 OR4N4Q8N0Y3 316 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 PSMF1Q92530 271 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 CCDC120Q96HB5 630 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 C10orf90Q96M02 699 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 ETNK1Q9HBU6 452 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 MKKSQ9NPJ1 570 aaPredicted RBP15.22■□□□□ 0.03
VCX3A-201ENST00000381089 DUSP10Q9Y6W6 482 aa15.22■□□□□ 0.03
VCX3A-201ENST00000381089 ANKRD17O75179 2603 aaKnown RBP15.22■□□□□ 0.03
VCX3A-201ENST00000381089 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 TXNDC9O14530 226 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 PFDN6O15212 129 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 CD3EAPO15446 510 aaKnown RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 NDUFS3O75489 264 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 MED26O95402 600 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 IFNB1P01574 187 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 GRNP28799 593 aaKnown RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 CA7P43166 264 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 CCZ1BP86790 482 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 CCZ1P86791 482 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 KLF1Q13351 362 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 SEMA3AQ14563 771 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 ZNF630Q2M218 657 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 GARNL3Q5VVW2 1013 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 HIBCHQ6NVY1 386 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 XKRXQ6PP77 449 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 LAPTM4BQ86VI4 370 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 MPP5Q8N3R9 675 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 CSNK1A1LQ8N752 337 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 LRRC57Q8N9N7 239 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 OR2A1Q8NGT9 310 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 RERGQ96A58 199 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 MMABQ96EY8 250 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 ZNF778Q96MU6 729 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 MESP1Q9BRJ9 268 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 DPH7Q9BTV6 452 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 MRPS30Q9NP92 439 aaKnown RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 R3HDM2Q9Y2K5 976 aaKnown RBP15.21■□□□□ 0.03
VCX3A-201ENST00000381089 NFS1Q9Y697 457 aa15.21■□□□□ 0.03
VCX3A-201ENST00000381089 OR2A25A4D2G3 310 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 OR5H15A6NDH6 313 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 RCCD1A6NED2 376 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 H0YGG7 62 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 PRAMEF2O60811 474 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 CCNDBP1O95273 360 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 MLYCDO95822 493 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 WDPCPO95876 746 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 F10P00742 488 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 ESRRAP11474 423 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 RPA3P35244 121 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 ARF3P61204 181 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 PRTGQ2VWP7 1150 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 FAAH2Q6GMR7 532 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 KIAA1328Q86T90 577 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 LDB1Q86U70 411 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 METTL21AQ8WXB1 218 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 TUBB6Q9BUF5 446 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 ACAT2Q9BWD1 397 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 FRMD8P1Q9BZ68 369 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 TGIF2Q9GZN2 237 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 ZNF700Q9H0M5 742 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 STOX2Q9P2F5 926 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 SH3BGRL2Q9UJC5 107 aa15.2■□□□□ 0.02
VCX3A-201ENST00000381089 REXO2Q9Y3B8 237 aaKnown RBP15.2■□□□□ 0.02
VCX3A-201ENST00000381089 C2CD3Q4AC94 2353 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 POLQO75417 2590 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 ZNF839A8K0R7 811 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 NRDCO43847 1150 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 APRTP07741 180 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 RPS3P23396 243 aaKnown RBP eCLIP15.19■□□□□ 0.02
VCX3A-201ENST00000381089 SLC26A3P40879 764 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 SMSP52788 366 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
VCX3A-201ENST00000381089 ZNF33BQ06732 778 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 CCSMST1Q4G0I0 132 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 PCID2Q5JVF3 399 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 FBXO42Q6P3S6 717 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 SMPDL3AQ92484 453 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 LURAP1Q96LR2 239 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms