RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CYP2A13Q16696 494 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 FAM174BQ3ZCQ3 159 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 PAGE2BQ5JRK9 111 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 PTCRAQ6ISU1 281 aaPredicted RBP17.07■□□□□ 0.32
CTTN-203ENST00000376561 NOXRED1Q6NXP6 359 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 NXPE4Q6UWF7 544 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 FAM9CQ8IZT9 166 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 BHLHE22Q8NFJ8 381 aaPredicted RBP17.07■□□□□ 0.32
CTTN-203ENST00000376561 DNAJB14Q8TBM8 379 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 REPS1Q96D71 796 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 FCRL1Q96LA6 429 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 FERD3LQ96RJ6 166 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 TACO1Q9BSH4 297 aaKnown RBP17.07■□□□□ 0.32
CTTN-203ENST00000376561 PCDHAC1Q9H158 963 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 CARS2Q9HA77 564 aaKnown RBP17.07■□□□□ 0.32
CTTN-203ENST00000376561 CMTM6Q9NX76 183 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 PCDHA9Q9Y5H5 950 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 SCAMP1O15126 338 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 CLCA4Q14CN2 919 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 SPANXN4Q5MJ08 99 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 ENPP7Q6UWV6 458 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 TSSK3Q96PN8 268 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 CDX2Q99626 313 aaPredicted RBP17.06■□□□□ 0.32
CTTN-203ENST00000376561 HAUS8Q9BT25 410 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 IMP3Q9NV31 184 aaKnown RBP17.06■□□□□ 0.32
CTTN-203ENST00000376561 CA14Q9ULX7 337 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 DUSP12Q9UNI6 340 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 PIPSLA2A3N6 862 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 ETHE1O95571 254 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 IL6P05231 212 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 PGRP06401 933 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 PCSK2P16519 638 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 TRAP1Q12931 704 aaKnown RBP17.06■□□□□ 0.32
CTTN-203ENST00000376561 LEXMQ3ZCV2 418 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 SYT13Q7L8C5 426 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 DHDDSQ86SQ9 333 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 LAS2Q8IYD9 372 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 KIAA2013Q8IYS2 634 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 ZNF687Q8N1G0 1237 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 NRG4Q8WWG1 115 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 SLC13A3Q8WWT9 602 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 OR1E3Q8WZA6 343 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 PDXPQ96GD0 296 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 METTL2AQ96IZ6 378 aaKnown RBP17.06■□□□□ 0.32
CTTN-203ENST00000376561 OR2M4Q96R27 311 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 ACAT2Q9BWD1 397 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 TRIM8Q9BZR9 551 aa17.06■□□□□ 0.32
CTTN-203ENST00000376561 ZNF839A8K0R7 811 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 PDZK1P1A8MUH7 402 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 C10orf142B7Z368 130 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 BAG2O95816 211 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 IGLV3-19P01714 112 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 MEF2AQ02078 507 aaPredicted RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 HIST2H2ACQ16777 129 aaPredicted RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 UAP1L1Q3KQV9 507 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 C6orf10Q5SRN2 563 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 TPRG1LQ5T0D9 272 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 C10orf62Q5T681 223 aaPredicted RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 HIST2H2AA3Q6FI13 130 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 DLEU7Q6UYE1 221 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 GCNT7Q6ZNI0 430 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 LRRC74BQ6ZQY2 392 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 TMEM125Q96AQ2 219 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 C11orf24Q96F05 449 aaPredicted RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 WDR92Q96MX6 357 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 EBPLQ9BY08 206 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 SPNS1Q9H2V7 528 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 GMPR2Q9P2T1 348 aaKnown RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 TAC3Q9UHF0 121 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 APBB3O95704 486 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 CDH1P12830 882 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 HTR1BP28222 390 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 AKT2P31751 481 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 RPS13P62277 151 aaKnown RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 ACSM2AQ08AH3 577 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 LAPTM5Q13571 262 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 RABL3Q5HYI8 236 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 ACSM2BQ68CK6 577 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 ANO7Q6IWH7 933 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 NANOGP8Q6NSW7 305 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 SMPDL3AQ92484 453 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 EGLN2Q96KS0 407 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 NANOGQ9H9S0 305 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 PRDM8Q9NQV8 689 aa17.05■□□□□ 0.32
CTTN-203ENST00000376561 RUVBL1Q9Y265 456 aaKnown RBP17.05■□□□□ 0.32
CTTN-203ENST00000376561 OR52A4PA6NMU1 304 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 CHURC1-FNTBB4DL54 471 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 H3BNX3 289 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 HSD17B1P14061 328 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 IL9P15248 144 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 CLNS1AP54105 237 aaKnown RBP17.04■□□□□ 0.32
CTTN-203ENST00000376561 MRPS22P82650 360 aaKnown RBP17.04■□□□□ 0.32
CTTN-203ENST00000376561 RNF111Q6ZNA4 994 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 PRR23BQ6ZRT6 265 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 Q7L0L9 218 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 C17orf64Q86WR6 236 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 HID1Q8IV36 788 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 RAB42Q8N4Z0 105 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms