RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 FOXS1O43638 330 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 FKBP9O95302 570 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 DDAH2O95865 285 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 COX6A1P12074 109 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 PKMP14618 531 aaKnown RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 CCNFP41002 786 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 CTBP1Q13363 440 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 TSTA3Q13630 321 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 FAAH2Q6GMR7 532 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 KIAA0930Q6ICG6 404 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 ZNF425Q6IV72 752 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 CYHR1Q6ZMK1 362 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 MAMDC2Q7Z304 686 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 SDCCAG8Q86SQ7 713 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 CILP2Q8IUL8 1156 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 REXO1L1PQ8IX06 675 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 LRRC56Q8IYG6 542 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 FOPNLQ96NB1 174 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 OR2A5Q96R48 311 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 MRPS30Q9NP92 439 aaKnown RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 FBXO6Q9NRD1 293 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 ABCF3Q9NUQ8 709 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 PLA2G3Q9NZ20 509 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 TAC3Q9UHF0 121 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 C3orf18Q9UK00 162 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
RPF1-201ENST00000370654 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 DOPEY1Q5JWR5 2465 aa12.52□□□□□ -0.4
RPF1-201ENST00000370654 POLEQ07864 2286 aa12.52□□□□□ -0.4
RPF1-201ENST00000370654 HEATR5BQ9P2D3 2071 aa12.52□□□□□ -0.4
RPF1-201ENST00000370654 GOLGA8MH3BSY2 632 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 SLC16A8O95907 504 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 HPP00738 406 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 F10P00742 488 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 ESR1P03372 595 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 FBLP22087 321 aaKnown RBP12.52□□□□□ -0.41
RPF1-201ENST00000370654 ATP5DP30049 168 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 CMPK1P30085 196 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 MAGEA6P43360 314 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 TSFMP43897 325 aaKnown RBP12.52□□□□□ -0.41
RPF1-201ENST00000370654 ADARP55265 1226 aaKnown RBP12.52□□□□□ -0.41
RPF1-201ENST00000370654 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
RPF1-201ENST00000370654 EEF1A2Q05639 463 aaKnown RBP12.52□□□□□ -0.41
RPF1-201ENST00000370654 GPS1Q13098 491 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 ZNF169Q14929 603 aaPredicted RBP12.52□□□□□ -0.41
RPF1-201ENST00000370654 ANKRD20A4Q4UJ75 823 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 NEPROQ6NW34 567 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 ZNF480Q8WV37 535 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 SMPDL3AQ92484 453 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 MS4A14Q96JA4 679 aa12.52□□□□□ -0.41
RPF1-201ENST00000370654 A0A0A6YYC8 382 aaPredicted RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 ZCWPW2A0A1B0GU75 182 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 E7ENX8 843 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 I3L1I5 382 aaPredicted RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 HAT1O14929 419 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 WISP2O76076 250 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 KRT14P02533 472 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 ACPPP15309 386 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 OGNP20774 298 aaKnown RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 PNLIPRP1P54315 467 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPF1-201ENST00000370654 TAP2Q03519 686 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 OCA2Q04671 838 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 CDC16Q13042 620 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 MFAP5Q13361 173 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 DHX34Q14147 1143 aaKnown RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 MUM1Q2TAK8 710 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 ICE2Q659A1 982 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 B3GNTL1Q67FW5 361 aaPredicted RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 PRMT9Q6P2P2 845 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 ISLR2Q6UXK2 745 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 ZNF662Q6ZS27 426 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 SIRT6Q8N6T7 355 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 CSNK1A1LQ8N752 337 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 ST6GALNAC3Q8NDV1 305 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 MAGEC3Q8TD91 643 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 BRIX1Q8TDN6 353 aaKnown RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 ZNF669Q96BR6 464 aaPredicted RBP12.51□□□□□ -0.41
RPF1-201ENST00000370654 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 C5orf34Q96MH7 638 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 TAAR6Q96RI8 345 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 TCF12Q99081 682 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 MACROD1Q9BQ69 325 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 YIPF2Q9BWQ6 316 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 PTGFRNQ9P2B2 879 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 TRPC4Q9UBN4 977 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 SH2B3Q9UQQ2 575 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 OSGIN2Q9Y236 505 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
RPF1-201ENST00000370654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms