RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 A0A088AWK7 358 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 A8MT66 165 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ZBTB14O43829 449 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 MAGEC1O60732 1142 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 C1QL1O75973 258 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 TPBGLP0DKB5 382 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 UGT1A6P19224 532 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 UGT1A1P22309 533 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 UGT1A4P22310 534 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 UGT1A3P35503 534 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 UGT1A5P35504 534 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 CCR10P46092 362 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 RGS4P49798 205 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ARFIP2P53365 341 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 NAA20P61599 178 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SEMG2Q02383 582 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 TTLL9Q3SXZ7 439 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 POM121L1PQ3SYA9 428 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SETMARQ53H47 684 aaPredicted RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 CFAP157Q5JU67 520 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 STEAP3Q658P3 488 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ERN2Q76MJ5 926 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 TRMT11Q7Z4G4 463 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 HSD11B1LQ7Z5J1 315 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 TECPR1Q7Z6L1 1165 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SIDT2Q8NBJ9 832 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 TXNDC5Q8NBS9 432 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 ARRDC3Q96B67 414 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 PDLIM5Q96HC4 596 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 VPS35Q96QK1 796 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SORT1Q99523 831 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 GATA5Q9BWX5 397 aaPredicted RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 C20orf27Q9GZN8 174 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 WWP1Q9H0M0 922 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 PRORYQ9H606 182 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 KCTD5Q9NXV2 234 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 DNAJC16Q9Y2G8 782 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 STON1Q9Y6Q2 735 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 PIAS3Q9Y6X2 628 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 CACNA1IQ9P0X4 2223 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 XIRP2A4UGR9 3374 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 A0A0G2JND7 137 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SPECC1L-ADORA2AF8WAN1 911 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 EIF3FO00303 357 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 AREL1O15033 823 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 ITM2AO43736 263 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SYNCRIPO60506 623 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 OR56A5P0C7T3 313 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 GALK1P51570 392 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 NAGLUP54802 743 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 GALNT1Q10472 559 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 SF3A3Q12874 501 aaKnown RBP eCLIP8.53□□□□□ -1.04
TPM3-213ENST00000368545 ACOX1Q15067 660 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 FBXO43Q4G163 708 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 TMEM52BQ4KMG9 183 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SPDYAQ5MJ70 313 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 LDLRAP1Q5SW96 308 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 Q6ZVL8 140 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 ZAR1Q86SH2 424 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 GLRX5Q86SX6 157 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 KBTBD6Q86V97 674 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 FAM181AQ8N9Y4 354 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 DDHD1Q8NEL9 900 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 DEFB124Q8NES8 71 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 RFWD2Q8NHY2 731 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 INPP5DQ92835 1189 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 PTERQ96BW5 349 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 FAM136AQ96C01 138 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 L3HYPDHQ96EM0 354 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 LINGO1Q96FE5 620 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 DTD2Q96FN9 168 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 THOC1Q96FV9 657 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 DCUN1D1Q96GG9 259 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CNDP1Q96KN2 507 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 RMDN2Q96LZ7 410 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 LRRC37BQ96QE4 947 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 ATOH8Q96SQ7 321 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 TRMOQ9BU70 441 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 TMEM120AQ9BXJ8 343 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 EML4Q9HC35 981 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 SPATS2LQ9NUQ6 558 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 PRSS50Q9UI38 385 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 POM121BA6NF01 834 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SHISA7A6NL88 538 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SLCO1B7G3V0H7 640 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 K7EQS6 105 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 LYPLA1O75608 230 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 AP2A2O94973 939 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 TSPAN12O95859 305 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CELA3BP08861 270 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CBSLP0DN79 551 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 ATP1B2P14415 290 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 ALOX15P16050 662 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 SPINK2P20155 84 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 DGKAP23743 735 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 AKT1P31749 480 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CBSP35520 551 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms