RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 KIAA0754O94854 1291 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 EIF2S1P05198 315 aaKnown RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 CDH1P12830 882 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 HSPA7P48741 367 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 ATP1A2P50993 1020 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 KRT71Q3SY84 523 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 MCATQ8IVS2 390 aaKnown RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 PLD6Q8N2A8 252 aaKnown RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 PDPRQ8NCN5 879 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 OR1L3Q8NH93 324 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 RERGQ96A58 199 aaPredicted RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 CLIP3Q96DZ5 547 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 PRAP1Q96NZ9 151 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 ATOH8Q96SQ7 321 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 ZFYVE21Q9BQ24 234 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 PLCD4Q9BRC7 762 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 TMEM121BQ9BXQ6 578 aaPredicted RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 CHRNA10Q9GZZ6 450 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 IQCGQ9H095 443 aaKnown RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 TMEM184CQ9NVA4 438 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 ZNF358Q9NW07 568 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 ARGLU1Q9NWB6 273 aaPredicted RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 CUEDC1Q9NWM3 386 aaPredicted RBP18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 EURLQ9NYK6 297 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 XPR1Q9UBH6 696 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 SLC22A14Q9Y267 594 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 SPEGQ15772 3267 aa18.4■□□□□ 0.54
HLA-DRB1-201ENST00000360004 CLGNO14967 610 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 EZRP15311 586 aaKnown RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TAC1P20366 129 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 GDF5P43026 501 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CSRP3P50461 194 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CCR8P51685 355 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 VSX2P58304 361 aaPredicted RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 YBX1P67809 324 aaKnown RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 RASA2Q15283 850 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 PFKFB4Q16877 469 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 C18orf21Q32NC0 220 aaPredicted RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 FBXO48Q5FWF7 155 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TECRLQ5HYJ1 363 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 PWWP2BQ6NUJ5 590 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 LCA5Q86VQ0 697 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 DNAJC22Q8N4W6 341 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TTC29Q8NA56 475 aaPredicted RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 SLC5A11Q8WWX8 675 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 FCRL4Q96PJ5 515 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 RUFY1Q96T51 708 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 MRPL57Q9BQC6 102 aaKnown RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 MRPL46Q9H2W6 279 aaKnown RBP18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CENPHQ9H3R5 247 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 DNAJC11Q9NVH1 559 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 OPTCQ9UBM4 332 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TMCO1Q9UM00 188 aa18.39■□□□□ 0.53
HLA-DRB1-201ENST00000360004 A0A1W2PPM1 405 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 OR2A25A4D2G3 310 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CPNE3O75131 537 aaKnown RBP18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 H2AFYO75367 372 aaKnown RBP18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 NTRK1P04629 796 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 HBQ1P09105 142 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CCNYL3P0C7X3 344 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 MSL3P1P0C860 447 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 LIPCP11150 499 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 NPPBP16860 134 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 KCNC1P48547 511 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CDC16Q13042 620 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TCTE1Q5JU00 501 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TMPRSS11BQ86T26 416 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 PAQR7Q86WK9 346 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 IL22RA1Q8N6P7 574 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 SNIP1Q8TAD8 396 aaKnown RBP18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 ESAMQ96AP7 390 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CNTNAP3BQ96NU0 1288 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 NDC1Q9BTX1 674 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CAPS2Q9BXY5 557 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 NLNQ9BYT8 704 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CNTNAP3Q9BZ76 1288 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 ACTR5Q9H9F9 607 aaPredicted RBP18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TXLNGQ9NUQ3 528 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 DCDC2Q9UHG0 476 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 RAXQ9Y2V3 346 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 AP1M2Q9Y6Q5 423 aa18.38■□□□□ 0.53
HLA-DRB1-201ENST00000360004 AKAP13Q12802 2813 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 COPEO14579 308 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 HAT1O14929 419 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 ZSCAN9O15535 394 aaPredicted RBP18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TLX3O43711 291 aaPredicted RBP18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 RAD1O60671 282 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CTSVO60911 334 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 GLRA3O75311 464 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 GSTA1P08263 222 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 GNAZP19086 355 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 ARL1P40616 181 aaPredicted RBP18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 SLC6A12P48065 614 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 CCT5P48643 541 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 ALDH18A1P54886 795 aaKnown RBP18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 PDK4Q16654 411 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 TLDC1Q6P9B6 456 aa18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 C6orf15Q6UXA7 325 aaPredicted RBP18.37■□□□□ 0.53
HLA-DRB1-201ENST00000360004 LRRC70Q7Z2Q7 622 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms