RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MATN2O00339 956 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 CCNDBP1O95273 360 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 CAPN1P07384 714 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 KITP10721 976 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 VARSP26640 1264 aaKnown RBP26.06■■□□□ 1.76
SSBP4-202ENST00000348495 ARL1P40616 181 aaPredicted RBP26.06■■□□□ 1.76
SSBP4-202ENST00000348495 HK2P52789 917 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 INAVAQ3KP66 663 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 FAM129CQ86XR2 697 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 OR4K1Q8NGD4 311 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 CCDC74AQ96AQ1 378 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 PTCD3Q96EY7 689 aaKnown RBP26.06■■□□□ 1.76
SSBP4-202ENST00000348495 EPB41L1Q9H4G0 881 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 PELI2Q9HAT8 420 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 SLC6A20Q9NP91 592 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 TMEM9BQ9NQ34 198 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 DNAJC15Q9Y5T4 150 aa26.06■■□□□ 1.76
SSBP4-202ENST00000348495 IGHV1OR21-1A0A087WYE8 117 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 ZNF195O14628 629 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 B4GAT1O43505 415 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 UROSP10746 265 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 CD59P13987 128 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 HGFP14210 728 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 JUPP14923 745 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 AMD1P17707 334 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 ALDH4A1P30038 563 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 OR1D5P58170 312 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 SLC5A12Q1EHB4 618 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 SPESP1Q6UW49 350 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 PRR23CQ6ZRP0 262 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 FAM20CQ8IXL6 584 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 CHCHD4Q8N4Q1 142 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 PRR11Q96HE9 360 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 SLC29A3Q9BZD2 475 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 RAB33BQ9H082 229 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 MRPS30Q9NP92 439 aaKnown RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 POMT2Q9UKY4 750 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 TIMM22Q9Y584 194 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 SNRNP200O75643 2136 aaKnown RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 FKBP9O95302 570 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 ALOX15P16050 662 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 CMPK1P30085 196 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 HNF4AP41235 474 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 PPP1CAP62136 330 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 KIAA1614Q5VZ46 1190 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 GRHL2Q6ISB3 625 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 SPRED1Q7Z699 444 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 METTL6Q8TCB7 284 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 NAT6Q93015 286 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 FAR2Q96K12 515 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 CCT8L2Q96SF2 557 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 EFCAB11Q9BUY7 163 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 FAM107BQ9H098 131 aa26.05■■□□□ 1.76
SSBP4-202ENST00000348495 NSRP1Q9H0G5 558 aaKnown RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 GEMIN8Q9NWZ8 242 aaKnown RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 COL5A1P20908 1838 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-202ENST00000348495 GPLD1P80108 840 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 PERM1Q5SV97 790 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 MAVSQ7Z434 540 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 CPLX4Q7Z7G2 160 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 MYLK4Q86YV6 388 aaPredicted RBP26.04■■□□□ 1.76
SSBP4-202ENST00000348495 WDR75Q8IWA0 830 aaKnown RBP26.04■■□□□ 1.76
SSBP4-202ENST00000348495 ABCG4Q9H172 646 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 SPNS1Q9H2V7 528 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 RABEP2Q9H5N1 569 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 VTI1BQ9UEU0 232 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 EPHA6Q9UF33 1036 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 FIS1Q9Y3D6 152 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 KLK4Q9Y5K2 254 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 USH1CQ9Y6N9 552 aa26.04■■□□□ 1.76
SSBP4-202ENST00000348495 SLCO1B7G3V0H7 640 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 H7BY64 318 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 HDAC3O15379 428 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 FAM107AO95990 144 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 SERPINB3P29508 390 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 LSSP48449 732 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 CCR8P51685 355 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 CPSF6Q16630 551 aaKnown RBP eCLIP26.03■■□□□ 1.76
SSBP4-202ENST00000348495 ZNF425Q6IV72 752 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 ARMC6Q6NXE6 501 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 PRAP1Q96NZ9 151 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 TRIM55Q9BYV6 548 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 NPHS2Q9NP85 383 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 TMEM184CQ9NVA4 438 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 EVA1BQ9NVM1 165 aa26.03■■□□□ 1.76
SSBP4-202ENST00000348495 CPED1A4D0V7 1026 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 H0YIV9 168 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 TNFSF14O43557 240 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 CRCPO75575 148 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 JUNP05412 331 aaKnown RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 HRH2P25021 359 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 GRIA3P42263 894 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 CSNK1G2P78368 415 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 SLBPQ14493 270 aaKnown RBP eCLIP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 TCHHL1Q5QJ38 904 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 NKAIN2Q5VXU1 208 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 TRIM73Q86UV7 250 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 RFWD2Q8NHY2 731 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 DPH7Q9BTV6 452 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 KCNK13Q9HB14 408 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms