RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CBSLP0DN79 551 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 CBSP35520 551 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 POU4F2Q12837 409 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 PPP1R26Q5T8A7 1209 aaPredicted RBP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 FAM198BQ6UWH4 519 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 PLD4Q96BZ4 506 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 YDJCA8MPS7 323 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 IFNA17P01571 189 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 LGALS2P05162 132 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 SHMT1P34896 483 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 ARL14Q8N4G2 192 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 HAS1Q92839 578 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 SLC35A5Q9BS91 424 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 IMP3Q9NV31 184 aaKnown RBP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 FNIP2Q9P278 1114 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 SCAMP3O14828 347 aaKnown RBP18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ACTA2P62736 377 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ACTG2P63267 376 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 TSPAN1O60635 241 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 IMPDH1P20839 514 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 LGI4Q8N135 537 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 YIPF7Q8N8F6 280 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 HYLS1Q96M11 299 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ASPNQ9BXN1 380 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 OR51V1Q9H2C8 321 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 RAI2Q9Y5P3 530 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 NT5C1B-RDH14C9J2C7 533 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 E9PAM4 449 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 SCGB1D2O95969 90 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 MATN1P21941 496 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 NFE2L1Q14494 772 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 GPAT4Q86UL3 456 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ZNF670-ZNF695F2Z2N8 137 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 OAZ2O95190 189 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ELP5Q8TE02 316 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ADARB2Q9NS39 739 aaKnown RBP18.91■□□□□ 0.62
HDAC4-201ENST00000345617 MALT1Q9UDY8 824 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 MAFFQ9ULX9 164 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 HGSNATQ68CP4 663 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 MEPEQ9NQ76 525 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-201ENST00000345617 A0A1W2PP18 115 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ELOA3DA6NLF2 546 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-201ENST00000345617 MATN3O15232 486 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 SOX30O94993 753 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 RASAL1O95294 804 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 PRNPP04156 253 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 BMP8BP34820 402 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 AVPR1BP47901 424 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ELOA3BQ3SY89 546 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 RAB41Q5JT25 222 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 BMP8AQ7Z5Y6 402 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ELOA3Q8NG57 546 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 TLR5O60602 858 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.91■□□□□ 0.62
HDAC4-201ENST00000345617 GALNT13Q8IUC8 556 aa18.91■□□□□ 0.62
HDAC4-201ENST00000345617 RHPN2P1A8MT19 583 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 FPR1P21462 350 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 PDZD9Q8IXQ8 264 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 ZUFSPQ96AP4 578 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TXN2Q99757 166 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TMED9Q9BVK6 235 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TM6SF2Q9BZW4 377 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 POU2F1P14859 743 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 PUM1Q14671 1186 aaKnown RBP eCLIP18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TMEM121BQ9BXQ6 578 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TNFRSF10BO14763 440 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 MT-ND2P03891 347 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 HERV-K104P61576 105 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 CMPK2Q5EBM0 449 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TREX2Q9BQ50 279 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TVP23BQ9NYZ1 205 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 RIMS1Q86UR5 1692 aaKnown RBP18.9■□□□□ 0.62
HDAC4-201ENST00000345617 PAOXQ6QHF9 649 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 C7orf61Q8IZ16 206 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 Q8N402 240 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 MAGEH1Q9H213 219 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 A0A1B0GVI7 797 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 H7C417 338 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 LYPLA2O95372 231 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 RHDQ02161 417 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 NUDT13Q86X67 352 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TSPEARQ8WU66 669 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 DNAJC13O75165 2243 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 PIAS1O75925 651 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 CSTBP04080 98 aaKnown RBP18.9■□□□□ 0.62
HDAC4-201ENST00000345617 IDSP22304 550 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 CCKBRP32239 447 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 ADRA1BP35368 520 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 MTPNP58546 118 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 MTFR1LQ9H019 292 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 MFSD11O43934 449 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 LRCH4O75427 683 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 ADORA2AP29274 412 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TLE2Q04725 743 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 PUS10Q3MIT2 529 aaKnown RBP18.9■□□□□ 0.62
HDAC4-201ENST00000345617 ALG1LQ6GMV1 187 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 HAVCR2Q8TDQ0 301 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 TMBIM1Q969X1 311 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 PYURFQ96I23 114 aa18.9■□□□□ 0.62
HDAC4-201ENST00000345617 CPNE5Q9HCH3 593 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms