RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 HNRNPA2B1P22626 353 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 KELP23276 732 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 PRPH2P23942 346 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SOX11P35716 441 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 HNF4AP41235 474 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 RPS13P62277 151 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 NFYCQ13952 458 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 CCDC6Q16204 474 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SFTPA2Q8IWL1 248 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 PCYOX1LQ8NBM8 494 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SLC5A11Q8WWX8 675 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 STMN2Q93045 179 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ROPN1LQ96C74 230 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 BIRC7Q96CA5 298 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 CMTM7Q96FZ5 175 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 TOE1Q96GM8 510 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 TMEM168Q9H0V1 697 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SLC6A13Q9NSD5 602 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 NDE1Q9NXR1 346 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ACSL5Q9ULC5 683 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 TRBV23OR9-2A0A075B6M9 112 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 SERTM1A2A2V5 107 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 PIPSLA2A3N6 862 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 SAP18O00422 153 aaKnown RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 TRIM38O00635 465 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 FPGTO14772 594 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 C1QCP02747 245 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 RAE1P78406 368 aaKnown RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 SELPLGQ14242 412 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NFATC4Q14934 902 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 PRAMEF14Q5SWL7 426 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 C6orf163Q5TEZ5 329 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 PRAMEF13Q5VWM6 474 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NOXRED1Q6NXP6 359 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NXPE4Q6UWF7 544 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 VN1R5Q7Z5H4 357 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 TMEM145Q8NBT3 493 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 TSPEARQ8WU66 669 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 WDR34Q96EX3 536 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 SERPINI1Q99574 410 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 S100A14Q9HCY8 104 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 ASIC5Q9NY37 505 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 STX18Q9P2W9 335 aaKnown RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 ABCD2Q9UBJ2 740 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 VPS29Q9UBQ0 182 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 PCDHA9Q9Y5H5 950 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 SPEGQ15772 3267 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NPIPB8E9PQR5 432 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 TBX6O95947 436 aaPredicted RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 GBAP04062 536 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 ANPEPP15144 967 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 CCR3P51677 355 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 CTBSQ01459 385 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 FLOT2Q14254 428 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 ATG9BQ674R7 924 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NANOGP8Q6NSW7 305 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 SYT13Q7L8C5 426 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 TBC1D21Q8IYX1 336 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 TMEM125Q96AQ2 219 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 PPM1MQ96MI6 270 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 DPY30Q9C005 99 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 TCEAL2Q9H3H9 227 aaPredicted RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 CLMPQ9H6B4 373 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NANOGQ9H9S0 305 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 ERVK-11Q9UQG0 969 aa13.09□□□□□ -0.31
CDC42-202ENST00000344548 NUP214P35658 2090 aaPredicted RBP13.09□□□□□ -0.31
CDC42-202ENST00000344548 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.31
CDC42-202ENST00000344548 ARHGEF17Q96PE2 2063 aaPredicted RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 TGFB1P01137 390 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 KIAA1024LP59773 190 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 MRPS22P82650 360 aaKnown RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 CYP2A13Q16696 494 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 SMU1Q2TAY7 513 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 GTDC1Q4AE62 458 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 ZNF542PQ5EBM4 170 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 CACHD1Q5VU97 1274 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 MED27Q6P2C8 311 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 CYP2R1Q6VVX0 501 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 Q6ZSR6 202 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 C1orf52Q8N6N3 182 aaKnown RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 GPR156Q8NFN8 814 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 FAM110BQ8TC76 370 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 OR2M4Q96R27 311 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms