RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ELP3Q9H9T3 547 aa14.45□□□□□ -0.1
CLCN1-201ENST00000343257 PCDH10Q9P2E7 1040 aa14.45□□□□□ -0.1
CLCN1-201ENST00000343257 SATB2Q9UPW6 733 aa14.45□□□□□ -0.1
CLCN1-201ENST00000343257 NYNRINQ9P2P1 1898 aaKnown RBP14.45□□□□□ -0.1
CLCN1-201ENST00000343257 OPN1SWP03999 348 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 GNPDA1P46926 289 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 RAB25P57735 213 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ALDH6A1Q02252 535 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 BTBD16Q32M84 506 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 TJAP1Q5JTD0 557 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 NADSYN1Q6IA69 706 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 TMEM132CQ8N3T6 1108 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 DNAJC22Q8N4W6 341 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 DTX3Q8N9I9 347 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 CD200R1Q8TD46 325 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 BRSK1Q8TDC3 778 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ULK4Q96C45 1275 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 MCCC1Q96RQ3 725 aaPredicted RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 FEVQ99581 238 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 NXF2Q9GZY0 626 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 NARFLQ9H6Q4 476 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ABCB9Q9NP78 766 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 MS4A12Q9NXJ0 267 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ITM2BQ9Y287 266 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 TRAV19A0A0A6YYK7 116 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 CLCA1A8K7I4 914 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 FAM220BPB1ANY3 271 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 SCAMP3O14828 347 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 RGS14O43566 566 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ULK1O75385 1050 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ERN1O75460 977 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 UBL4AP11441 157 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 BCKDHAP12694 445 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 POU1F1P28069 291 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 RPS19P39019 145 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 SOX3P41225 446 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 CTSL3PQ5NE16 218 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 UBXN11Q5T124 520 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 PXDC1Q5TGL8 231 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 MANEALQ5VSG8 457 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 FAM131AQ6UXB0 335 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 TMPRSS11AQ6ZMR5 421 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 GALNT7Q86SF2 657 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 LRRTM3Q86VH5 581 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 RNF175Q8N4F7 328 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 YIPF7Q8N8F6 280 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 GRPEL2Q8TAA5 225 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 IGSF8Q969P0 613 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 TMCO6Q96DC7 493 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 MALT1Q9UDY8 824 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 SAMD4AQ9UPU9 718 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 LOC285095A0A1B0GVY8 99 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 RFXANKO14593 260 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 GPX5O75715 221 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 MC4RP32245 332 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 GPR162Q16538 588 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 OVOS1Q6IE37 1185 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 LIMS2Q7Z4I7 341 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 AMIGO1Q86WK6 493 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 CFAP52Q8N1V2 620 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ST13P5Q8NFI4 369 aaPredicted RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 SPPL2AQ8TCT8 520 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 DEDD2Q8WXF8 326 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 GFM1Q96RP9 751 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 CCM2Q9BSQ5 444 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 SPON2Q9BUD6 331 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 ASPNQ9BXN1 380 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 CCDC59Q9P031 241 aaKnown RBP14.44□□□□□ -0.1
CLCN1-201ENST00000343257 RBPJLQ9UBG7 517 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 DUSP12Q9UNI6 340 aa14.44□□□□□ -0.1
CLCN1-201ENST00000343257 MN1Q10571 1320 aaPredicted RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 IL6P05231 212 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 NUDT7P0C024 238 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MYL9P24844 172 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MRPL19P49406 292 aaKnown RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MLLT6P55198 1093 aaPredicted RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 TBCEQ15813 527 aaPredicted RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 USP39Q53GS9 565 aaKnown RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 C10orf62Q5T681 223 aaPredicted RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MSANTD2Q6P1R3 559 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 DPY19L3Q6ZPD9 716 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MDGA1Q8NFP4 955 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 WDR36Q8NI36 951 aaKnown RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MAL2Q969L2 176 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 EBPLQ9BY08 206 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 MKRN2Q9H000 416 aaKnown RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 AFF4Q9UHB7 1163 aaKnown RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 HSPE1-MOB4S4R3N1 261 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 LOC730098B7Z3J9 87 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 SNX4O95219 450 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 KCNE1P15382 129 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 OGNP20774 298 aaKnown RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 OR1E2P47887 323 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 EFEMP1Q12805 493 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 EFR3AQ14156 821 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 TIGD5Q53EQ6 642 aa14.43□□□□□ -0.1
CLCN1-201ENST00000343257 INO80DQ53TQ3 878 aaPredicted RBP14.43□□□□□ -0.1
CLCN1-201ENST00000343257 ATG9BQ674R7 924 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms