RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TMIGD1Q6UXZ0 262 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 LGR4Q9BXB1 951 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 IL23AQ9NPF7 189 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 FZD4Q9ULV1 537 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 NPIPA1Q9UND3 350 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 SNX4O95219 450 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 POLR2CP19387 275 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 PREPP48147 710 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 RPL26P61254 145 aaKnown RBP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 GPRC6AQ5T6X5 926 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 ADNP2Q6IQ32 1131 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 TMLHEQ9NVH6 421 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 DNAJB4Q9UDY4 337 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 PLAGL1Q9UM63 463 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 ERN2Q76MJ5 926 aaKnown RBP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF676Q8N7Q3 588 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 SLC5A11Q8WWX8 675 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 LRTOMTQ8WZ04 291 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM209Q96SK2 561 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 KCNH6Q9H252 994 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 PTGES2Q9H7Z7 377 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM248Q9NWD8 314 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 HNRNPA1P09651 372 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 GRIA1P42261 906 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 C6orf52Q5T4I8 152 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM214Q6NUQ4 689 aaKnown RBP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 ADGRD2Q7Z7M1 963 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 IL22RA1Q8N6P7 574 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 BANPQ8N9N5 519 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM109Q9BVC6 243 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 HRASLS2Q9NWW9 162 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 PDCD5O14737 125 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 LDB2O43679 373 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 HMGN1P05114 100 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF3P17036 446 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ADAM8P78325 824 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 MXD1Q05195 221 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 AGTRAPQ6RW13 159 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 OLFML1Q6UWY5 402 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 PHOSPHO1Q8TCT1 267 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 TNFAIP8L1Q8WVP5 186 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 TRIB2Q92519 343 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 UFD1Q92890 307 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 TBX5Q99593 518 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SPHK2Q9NRA0 654 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SLC17A6Q9P2U8 582 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 MAN2B1O00754 1011 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 VEGFDO43915 354 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 LINGO3P0C6S8 592 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ARSJQ5FYB0 599 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 KBTBD6Q86V97 674 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 C1orf216Q8TAB5 229 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SLC35B2Q8TB61 432 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF384Q8TF68 577 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ZDHHC12Q96GR4 267 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SUSD2Q9UGT4 822 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 MUSKO15146 869 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 RAP2AP10114 183 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 MAP3K8P41279 467 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF41P51814 821 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 ABATP80404 500 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 MADCAM1Q13477 382 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 KLHL26Q53HC5 615 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 CLEC12AQ5QGZ9 265 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 GPR153Q6NV75 609 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 STX12Q86Y82 276 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 CEP97Q8IW35 865 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 PNLDC1Q8NA58 520 aaKnown RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 OR6N1Q8NGY5 312 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SLC29A3Q9BZD2 475 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 CLIC1O00299 241 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 PRAMEF11O60813 436 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 CNTN5O94779 1100 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 IL33O95760 270 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 PAK4O96013 591 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 TACSTD2P09758 323 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 RPS21P63220 83 aaKnown RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SEMA3AQ14563 771 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SLC5A9Q2M3M2 681 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 FAM156AQ8NDB6 213 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 LRRC3Q9BY71 257 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 OR8D2Q9GZM6 311 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 TLL2Q9Y6L7 1015 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-202ENST00000342494 COCHO43405 550 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 FAM214AQ32MH5 1076 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 OR4F3Q6IEY1 312 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 OR9A1PQ8NGU1 263 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 TUBGCP5Q96RT8 1024 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 SLC2A6Q9UGQ3 507 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 COMMD3-BMI1R4GMX3 469 aa14.61□□□□□ -0.07
UBE3B-202ENST00000342494 NID2Q14112 1375 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF432O94892 652 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 BCHEP06276 602 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 ANXA8P13928 327 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 ENGP17813 658 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 GBX2P52951 348 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-202ENST00000342494 PLEKHG6Q3KR16 790 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms